Shewanella woodyi: Swoo_0089
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Entry
Swoo_0089 CDS
T00676
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K02482
two-component system, NtrC family, sensor kinase [EC:
2.7.13.3
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
swd01001
]
Swoo_0089
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
swd02022
]
Swoo_0089
Enzymes [BR:
swd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Swoo_0089
Protein kinases [BR:
swd01001
]
Histidine kinases
NtrC family
Swoo_0089
Two-component system [BR:
swd02022
]
NtrC family
Unclassified
Swoo_0089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
sCache_3_3
Cache_3-Cache_2
HisKA
HAMP
Gp-FAR-1
DUF2630
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ACA84390
UniProt:
B1KL49
LinkDB
All DBs
Position
108979..111096
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AA seq
705 aa
AA seq
DB search
MSFFPRIFGINWQQMQAKVRYRILILTLLPILLTLVSLVFITIYWNISYTGKQLFMKVKA
DLTVANNTLISVQRSQEKQLEMVMESWPFQNDFRLFSGTKQKYRDEIDSLLEERKEQLNL
DFLRLVSVSEAAADPDLRQMLQRVNGVTPFSGLMVLSPERLARIDPELVKLASIPLVETP
RSQKPSKSVEERGMLSRSLLPVPDAHGNVSWYLDGGILFNRDIRIVDHIRDLVYDKGTLP
ERSIGTVTIFLDNTRISTNVPLHFFPQGDQSVGRALGSLVSEEVKSKVLTQGMLWVDRAF
VFNDWFISAYAPLEDVQGKRVGMIYTGFSESPFIHNYLLNIIELGTILMLVLLVSGLLVY
RGAYSLLQPIERIHHVVKAVQSGRNLRIGSLGLERDNELSNLAEQFDRMLDLLQKRNTQI
QAAAEQLEVKVEERTRSLQEKTVELQNNVELLNETRQQLVTNEKLTALGELTAGIAHEIN
NPTAVILGNMELLKFELGQNADCVEEEIELVIQQVGRISTIIRSLLQYSRPGEFNAPLEM
HQLTPIIEEMLVLVRHSIKEQKVVLTQELNASYPIEVNRPQLLQVLINLVVNAAHAMNED
GRIWIRTYDWVVKDEPIGVKIEVEDEGKGIPKEQLNRIFDPFYTTRADGTGLGLSLSYGI
IKRIGGTIEVSSTVGKGTLFTIGLYHKAKEDQNDTPYKGLHFNES
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcttcccacgaatttttggcattaactggcagcagatgcaggcaaaggtgcgt
tatcgcatcttgattttaaccttgctcccgatattgttaaccttggtaagcttagtgttt
atcaccatctactggaacattagctacacgggcaagcagctgtttatgaaggtgaaagct
gatcttactgttgccaataacaccttaatttcagtgcagcgcagtcaagagaagcagctt
gagatggtgatggaatcttggccatttcaaaatgactttagattgttttccggcactaaa
caaaaatatagagatgagatagatagtttactcgaagagcgaaaagagcagcttaattta
gactttttacggttagtgagtgtctctgaagcggcagccgatcccgatcttcgtcagatg
ttgcagcgagtgaatggggtcactcccttttctgggttgatggtgttatcaccggagcgt
ctagccagaattgatcctgagttggttaagcttgccagtatcccccttgttgaaacgcct
agatctcaaaagccaagtaagagtgtggaggagcgggggatgttgagccgtagcctgctc
cctgtgcccgatgcacatggtaatgtctcctggtatctcgatggcggtattttatttaat
cgcgatatccgtattgtcgatcatattcgcgatctggtttatgacaagggcacacttcct
gaacgctctataggtactgtcactatcttcctcgacaatacccgcattagcaccaatgta
ccgctgcactttttcccccaaggcgatcaatccgttggtcgagccttaggtagcttggtc
tctgaggaggtgaagtcaaaagtgttaactcaggggatgctttgggtcgatcgcgctttt
gtatttaatgattggtttatctcggcttatgcgccccttgaagatgtgcagggcaagcga
gttggcatgatctacacaggattttcagaatcgccttttatccataattatctactgaat
attatcgaattaggtaccatcttgatgttggtactgctggtatcgggactgttggtttat
cgaggggcgtacagtttacttcagcctattgagcgtattcaccatgttgttaaggcggtg
cagtcgggacgtaacttacgtattggctcactagggctagagcgtgacaatgagctatcc
aatttggcggagcagtttgatcgcatgttggatctgctgcagaagcgtaatactcagatc
caagcggcagcagagcagcttgaggtgaaggtggaggagcgcacgcgcagtcttcaggag
aagacggttgagctacaaaataacgtcgagctgttaaatgaaaccagacagcagttggtg
accaatgaaaagcttaccgctttgggtgagttaacggcgggtatcgcccatgagatcaat
aacccaacagcggttatcttgggaaatatggagctgcttaagtttgaattgggacagaac
gccgattgtgttgaggaggagatcgagctggttatccagcaggtgggacgaattagcact
attattcgtagtcttctgcagtacagccgaccaggagagttcaatgcgcctttagagatg
catcaactcacccctattatcgaagagatgttggtgttggttaggcactcgattaaggag
cagaaggtggtgctgactcaggagctcaatgccagttaccccattgaggttaatcgtcct
cagctgcttcaagtattgattaatttagtggtcaatgctgcccatgcgatgaatgaagat
ggacgcatctggatacgcacctatgactgggttgtgaaggatgagcctattggtgtgaag
atagaggtggaagatgaaggtaaggggatccctaaggagcaacttaatcgtatcttcgat
cctttttataccaccagagccgatgggacaggattaggcttgtctctgagttacgggatc
atcaagcgtattggtggcaccatagaagtgagctccaccgtgggcaaggggacgctattt
accataggtctctaccataaagctaaagaagatcagaatgacaccccctacaaagggctg
cattttaacgagagttga
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