KEGG   Shewanella woodyi: Swoo_0190
Entry
Swoo_0190         CDS       T00676                                 
Name
(GenBank) efflux transporter, RND family, MFP subunit
  KO
K07798  membrane fusion protein, copper/silver efflux system
Organism
swd  Shewanella woodyi
Pathway
swd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:swd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Swoo_0190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:swd02000]
    Swoo_0190
Transporters [BR:swd02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Swoo_0190
SSDB
Motif
Pfam: HMBD Beta-barrel_RND_2 BSH_CusB RND-MFP_C YknX_C CzcB_C BSH_CzcB 3HB_CusB BSH_RND RUBY_RBDX
Other DBs
NCBI-ProteinID: ACA84491
UniProt: B1KM78
LinkDB
Position
complement(231234..233033)
AA seq 599 aa
MSQLEMNNKRNKLAYLLSLFMVVTPQLAHSQSLLAQTAPEPKHVAHNHSHGSATYVCPMH
PNETSHEAGSRCSICNMFLVEAEEEGEKGSHGDHLAMEQKAYVCPMHPDETSHEAGSRCS
ICNMFLVEDEEEEEKGSHGDHLAMEQKTYVCPMHPDETSHEAGSRCSICNMFLVEAEEEE
EKGEIDHSNHDMSAMPADEHSGHSHQAASTPADAVFNAAEPTPLNDGGSIKYVCPMHAHI
ISDVPGTCPICGMNLEKVEVGGSSKEIQIDVSGGMQQALALKVARVEKDTLWKFVQTVGQ
VDYDESQINHIHARVNGWIEKLTITSVGDKITKGQLLYEIYSPELINAQDDFLLAQDTVK
RAGKDANYQDLVRKAGLRLELLGFQPYQIKALAKSKKTQYRVPFYAKSDGIVKALNVRDG
MYIQPATEVMSVVDLSKVWVIADVFENEQSWLAVGQKAEISVPAMGIKGIEGEIDYIYPE
LDPVTRSLRVRIVVSNTDIELRPNTLAKIGIFGGPNKDVLVIPQEALIQTGKENRVIVKL
EDNNFTARKVTVGMLSQGKAEIKEGLAENERVVTSGQFLLDSEASLKGSLMRLSSGHQH
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgagtcaattagagatgaacaataaacgcaacaaattagcctatctgctgagccttttt
atggtggtcactccgcagctagcccactctcaatcgttattagcgcaaacagcgccagag
ccaaaacatgtagcgcataaccacagtcatggctcagcaacttatgtgtgccctatgcac
cctaatgaaaccagtcatgaagctggcagtcgctgctccatctgcaacatgttccttgtg
gaagctgaagaggaaggggaaaaggggtcacatggtgatcacttagccatggagcagaaa
gcctatgtttgccctatgcatccagatgaaaccagtcatgaagctggcagtcgttgctcc
atctgcaacatgttccttgtggaagatgaagaggaagaggagaaggggtcacatggtgat
cacttagccatggagcagaaaacctatgtttgccctatgcatccagatgaaaccagtcat
gaagctggcagtcgttgctccatctgcaacatgttccttgtggaagctgaagaggaggag
gaaaagggggagatagatcactctaaccacgatatgagtgccatgcctgcagatgaacac
tcaggacattcacaccaagcagcaagcactcctgcagatgctgtatttaatgcagcagag
cctacgccattaaatgatggcggcagtatcaaatatgtctgtcctatgcatgcacatatt
atcagcgatgtgccagggacatgtcctatctgtggcatgaacttggaaaaagttgaagta
ggaggcagcagtaaagagatacagatagatgtatccggtggcatgcagcaggcactcgcc
ctgaaagtcgctagagtcgagaaagacaccctatggaagtttgttcaaaccgtaggtcag
gttgattacgatgagagccagatcaatcacatacatgcacgcgtcaatggctggattgag
aagttaaccattacctctgtcggtgacaagataaccaaaggtcagcttctctatgagatc
tactcccctgagcttatcaacgcacaggatgatttcctgcttgctcaggataccgtcaaa
cgagcgggcaaagatgcaaattaccaagatctcgtcagaaaagcggggctcagattggag
cttcttgggtttcaaccttatcagataaaagcgttagcaaaatcgaaaaaaacccaatac
cgggtccccttttacgccaagagtgatggcatagtaaaagccttaaatgtcagagatggt
atgtatatccaacccgccaccgaagtcatgtccgtcgtcgacctttctaaagtttgggtt
attgccgacgtgtttgaaaatgagcagagctggctagctgttggacaaaaagcggagatc
tccgtcccagcgatgggaattaaaggtatcgaaggtgagattgactacatttaccccgaa
cttgatcccgtcacccgtagtttaagagttcgtatcgtagtatcaaatactgatattgag
ctcagacccaatactctagctaaaattgggatcttcggcggtcccaataaagatgtgctt
gtgatacctcaagaggcgctgatccaaaccggcaaagagaatcgtgtcatcgttaaactc
gaagataataactttaccgcccgcaaagtgactgtaggtatgttaagccaagggaaagct
gagataaaagaggggcttgctgaaaatgagcgtgtcgtgacctctggtcagttcctgctc
gattcagaagccagcctaaaaggcagcttaatgcgccttagcagcggccaccagcactag

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