Shewanella woodyi: Swoo_0204
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Entry
Swoo_0204 CDS
T00676
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swd03021
]
Swoo_0204
Transcription machinery [BR:
swd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Swoo_0204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ACA84505
UniProt:
B1KM92
LinkDB
All DBs
Position
253836..254687
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AA seq
283 aa
AA seq
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MTNQSMALTVPHGSGSLEAYVHSAHNISMLEPEQEYELAKRLQETGDLQAAKQLIMSHLR
FVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYVLK
NWRIVKVATTKAQRKLFFNLRKSKKRLGWFSDEEVGMVADNLGVSKADVTEMESRMAAQD
PAFDLASDNDDDQDFSPVHYLEDHSSDLASQVENDNLESNNQARLLSAIKTLDERSQHIL
QARWLNEDKTTLQELAATYQVSAERIRQLEKNAMNKLKGRMEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaatcaatggcacttacggttcctcacggaagcggtagcttagaggcttat
gtccactctgcgcacaacatctcgatgttggagccggagcaggagtatgagttagctaag
cgattacaagaaacaggtgatcttcaggctgcgaaacagctcattatgtctcacctacgt
tttgtagtgcatgttgctaaaggttactcaggttatggtcttcctcaggctgatcttatc
caagagggtaatattggtttgatgaaagcggtgaagcgtttcgacccagatgtgggcgtt
cgattggtttcatttgctgtgcattggatcaaagctgaaattcatgaatatgtgctgaaa
aactggcgcatagtaaaggttgcgacaactaaagcacagcgtaagttgttctttaacctt
cgtaaatctaaaaaacgtctcggttggtttagtgatgaagaggttggcatggttgccgat
aaccttggtgtctctaaagccgatgtgactgagatggaatcgcgtatggcggcacaagat
cctgcattcgatcttgccagcgacaacgatgatgaccaagacttctctccggttcactat
ttagaggaccactcctcagatctggcatcacaagttgaaaatgataacttagagtcaaat
aaccaagcgcgcctactgtcagccatcaaaaccttagatgagcgtagtcagcatatcctg
caagcacgctggttaaatgaagataagacaacgctacaagaacttgctgcaacataccaa
gtctctgctgagcgtattaggcaacttgaaaagaatgctatgaacaagcttaaaggacga
atggaagcgtaa
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