Shewanella woodyi: Swoo_0213
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Entry
Swoo_0213 CDS
T00676
Name
(GenBank) TonB-dependent receptor plug
KO
K02014
iron complex outermembrane recepter protein
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_0213
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_0213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACA84514
UniProt:
B1KMA1
LinkDB
All DBs
Position
complement(263314..265644)
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AA seq
776 aa
AA seq
DB search
MNEKVKYNNYSNSIIVLSLLFNAPVFSEESDKKEKSQTLEVITVTAQKRVESLQETPIAV
TAFTADGLEKMQVGNIAEIENFTPNLVFDTSSPIGGSSTSAAVFIRGIGNTDFSLTTDPG
VGTYIDGVYVSRSIGGVLDLLDVERIEVLRGPQGTLFGRNSIGGAINITTRKPYDELAGR
LDLTLGSFNRTDVRGSIDIPFTDELLSTFAFSSKRRDGFVERPLIGDELGNEDQLAFRGA
LYYEPNDEWNFQLSFDHSDIDEESAANVAVGFTPGAGTIGWALATYPTLSPDAAIVAGLK
DLDKYITKDDKDVSYGTYNNGSSATVDGASFVANTHQDNFDLKYTAAYRRTKAAFHADAD
NTPFQITEISNPDYYHKQISHELQFLGTAMDDQIKYIAGVYYFDESGTDNVFVPLHLPTP
DLSAGFPAGLNNYADVENSSLAEYLQATWDINDTFSVTAGVRHTLDKKQFDYTQYLAADI
QGNPLPFFPGAVDETGTFRPGLSPLVGNGSGSISDNFEQTTFKLGVDAILDDGTLLYYSF
SQGFKSGGFVLRYVESVAAPRTFEPETLDAHEIGIKWQSDNERIRVNGAVFYSDYQDAQV
TFFDKLGGPITANAGEIDIKGVELEITALITDDLILDIGYGYIDAAYNNINPVEGLSLTL
DKSAKLVNTPENSLHIGLDYSLYFDESDIAFRVDYAYTDDVFNDSQNSKFLFQEAHDMFN
ASIRYNLNESVGFVAFVNNLTDKRVIKSGNSNFGLGFHSASYNKPREFGLAVKYTF
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaagtaaaatataataactatagcaacagcattattgtactgtctttgtta
ttcaatgcgcctgtattttctgaagaaagtgataaaaaagagaaaagccaaacactcgaa
gtgattacggtgaccgcgcaaaaaagagttgaatcactacaagaaacacctatcgcagtg
accgcatttaccgccgatggccttgaaaaaatgcaagttggcaatattgcagaaatagaa
aatttcacccccaatttagtgtttgatacctcatctccaataggtggctcatcaaccagt
gcggccgttttcatacgcgggatcggcaatacagacttcagtttaaccacagatccaggt
gtagggacgtatattgatggcgtatatgtctctcgttctatcggtggcgtattagatctc
cttgatgttgagagaatagaggtgctgagaggaccacaaggcaccctatttggccgtaat
agtattggtggggctattaatattactacgcgtaagccatatgatgagcttgctggccgt
ttagatctcactttgggtagctttaatcgaactgatgttcgtggctcaattgatattcct
tttacagacgaattactgtccacatttgccttttcaagtaaacgcagagatggctttgtt
gaacgcccgctcataggcgatgaactcggtaatgaagaccaacttgcgtttcgtggagcc
ttatattacgaacccaatgatgagtggaattttcaactctcctttgaccattcagatata
gacgaagagagtgcagctaatgtcgccgtgggctttacccctggtgcaggcacaataggt
tgggcactggcgacctatccaacattatcaccagatgcggcaatcgttgcaggacttaaa
gacttagacaaatacataaccaaagatgataaagacgtatcctatggaacatacaacaat
ggcagcagcgcaacggtagatggagcctcatttgtcgccaatactcatcaagacaatttt
gaccttaaatacactgcagcatatcgtagaacgaaggctgcattccatgcagatgccgat
aacacgccatttcaaattaccgagatttcaaacccagattattatcataagcagattagt
catgagcttcagttcttgggcaccgctatggatgaccaaatcaagtacattgctggggtc
tattactttgatgaaagcggtactgataatgtgtttgttccactgcacctaccaacccca
gatttaagcgctggtttccctgctgggttaaataactatgccgacgttgagaactctagt
cttgctgaatatttacaagcaacttgggatattaacgacacattctcagtcacggcaggt
gttagacacacactagataaaaagcaatttgattatacccagtaccttgctgctgacatt
caaggcaatccgttaccgtttttccctggtgctgttgatgaaacaggtacatttcgcccc
ggactctcaccattagtgggcaatggcagtggctctatttctgataattttgagcagaca
acatttaagcttggtgttgatgccatattagatgacggcactcttctgtattacagcttc
tctcaaggattcaaaagcggagggtttgttttacgctacgtagaatcggtagccgcacct
cgtacctttgaaccagaaaccttagatgcacatgaaataggaatcaaatggcaaagtgat
aatgagcgtatccgagtcaacggcgcggtgttctattcagactatcaggatgcacaagtc
accttttttgacaaactcggcgggccaattacagccaacgctggagagattgacattaaa
ggcgtagagcttgagataaccgccttaatcacagacgatctcattcttgatattggctac
ggctacattgatgcagcatacaataacatcaatcccgttgaaggtttatcattgacctta
gataagtccgctaagctagtaaatacacctgagaactcattacacattggtttagattac
agtctttacttcgatgaaagcgatatcgctttcagagttgattatgcgtataccgatgat
gtatttaatgactctcaaaactcaaaatttctatttcaagaagcccacgacatgtttaat
gcttcaattagatataatttaaatgaaagtgttggcttcgttgctttcgtcaataaccta
accgataaaagagttattaaaagtggcaactctaatttcggccttggttttcactctgca
agttataataaaccaagagagtttggcctagccgttaaatacactttctaa
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