Shewanella woodyi: Swoo_0287
Help
Entry
Swoo_0287 CDS
T00676
Name
(GenBank) uroporphyrinogen decarboxylase
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
swd
Shewanella woodyi
Pathway
swd00860
Porphyrin metabolism
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01240
Biosynthesis of cofactors
Module
swd_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Swoo_0287
Enzymes [BR:
swd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
Swoo_0287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
URO-D
PutA_1st
Motif
Other DBs
NCBI-ProteinID:
ACA84588
UniProt:
B1KN91
LinkDB
All DBs
Position
354494..355558
Genome browser
AA seq
354 aa
AA seq
DB search
MAELKNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVT
LQPLRRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIKKLSIPDPEDE
LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHM
LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG
RQVPVTLFTKGGGLWLESMAETGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYAS
PERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPEHAGAFINSVHELSAKYHK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattaaaaaacgatcgttatttacgcgccttactaaaacaacctgtcgacaga
actccagtttggatgatgcgtcaagctggccgttatcttccagagtacaaagcgacacgc
gctgaagctggtgattttatgtcactgtgtaaaaatcaggacttagcttgtgaagttacg
cttcaaccacttcgtcgatatgatcttgatgctgctattctgttttcagatattttgaca
atacctgatgctatgggtttaggtctgtatttcgaaaccggtgaaggtcctcgtttccaa
cgtcctaccgacacgatcgatgcgatcaaaaagctttcaattccagatccagaagatgag
cttggctacgtgatgcgtgcggttagcactattcgtcgtgagcttaaaggtgaagttcct
ttgattggcttctctggctcaccttggactctggcaacttacatggttgaaggcggttca
agcaagacattcgaaaagattaagaagatggcttacgaagagccagcaactttgcatatg
cttctcgacaagcttgctgattcagtgatcttatacctgaatgctcaagtagcaaatggt
gcacagtctctgatgattttcgattcatggggtggtgcgttatctcatcatgcataccgt
gagttctctctgcgttatatgcagaagatcgttgatggcttaacacgtcatgcagatggc
cgccaagttcctgtaactctgttcactaagggtggcggtttatggttggaatcaatggct
gaaactggctgtgatgcacttggtttggattggactgttgatattggtgatgcacgtcgt
cgtgttggccataaagttgccctacagggtaatatggacccatctgtactgtatgcttct
cctgagcgtattcaccaagaggtagatcaaattctatctagctatggtgaaggtactggt
catgtatttaacttaggccatggcattcaccaacatgtggatcctgagcatgctggcgcc
tttatcaattcggtacatgagctgtcagctaaataccataagtaa
DBGET
integrated database retrieval system