KEGG   Shewanella woodyi: Swoo_0304
Entry
Swoo_0304         CDS       T00676                                 
Name
(GenBank) type III restriction protein res subunit
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
swd  Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:swd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:swd02048]
    Swoo_0304
Enzymes [BR:swd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     Swoo_0304
Prokaryotic defense system [BR:swd02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   Swoo_0304
SSDB
Motif
Pfam: ResIII DEAD SWI2_SNF2 TPR_27
Other DBs
NCBI-ProteinID: ACA84605
UniProt: B1KNA8
LinkDB
Position
complement(372533..375205)
AA seq 890 aa
MFQLKSYQQGALDTLASFFKRCRETNNIETSFSESLKENNFTDVPYRAYKFDNTPYVCVR
IPTGGGKTILGTYAISTAAKEFLSKSYPITLWLVPTTTIQQQTVAALKSNPAYTEHLNKA
FANNVSVYDIADVNQIRSQDIGNKAIIVVSTLANLRVTKTTDRKVYQYHEDFEPHFSKLT
SANPAFDKLEKVTEDDVSENGLTVRDIGKVKYSFANLLALYNPLVIVDEAHNARTPLTFD
TLKRVYPAAIMEFTATPNTTGTNASNILYHVSAAQLKAEEMIKLPIILTEHVNGWEEAVR
DAVLTRERLAVKAQKDTDYIRPIVLLQAESKSGKVTVDVLKQCLMEQHHIDESKIAIATG
TQRELDGLDIFQPDCPVEFVITIEALKEGWDCSFAYVFCSVKQVSSSKDAEQLLGRVLRM
PYAKRRVIEDLNRAYAHLSTNSLAQAAKELADKLIAMGFEELEVATFLRQQDASQGELFD
SSGNKKPESKLSPTTLMVEVKDVVDSTLLTEEDRSSIKVSEVEGRKVVTVTGKVSDTLKK
ALEKVAIEPKKSIERSIKMHNQSVYAAQSPSENGAKFAVLPRLCVMSQGELELAEKEVFL
DAFGWNLLDYPAVLDYKPTEDTTSFSVDLQGKKVKYSFVDDTQTLNLNFANTDVTQDELV
GWLDMECRQSDVTQREMTGFMSNVINHLMKKPELTLTTLIRNKYPLANAIQDLVSEYRKQ
AATKGYQQALFSNESEVLTTYDFSYEFKANNYPARPPYYSGSYDFNKHYYPQIEDMKSSG
EEFDCAQIIDLMPEVKHWVRNLVRREEASFSLPLAHGNFFPDFIVELNDGRILVVEYKGE
AYKTNDDSAEKRLVGDLWAKHSQGNCLFLMAVKKDDNGQGVRQQLLNIIS
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgttccagttaaaaagctaccaacaaggtgcgttagataccctagctagtttcttcaag
cgctgccgtgagacgaataatatagaaacatctttcagtgaatctttaaaagagaataat
ttcactgatgtaccatatcgagcttataaatttgataatactccttatgtctgtgttcgt
attccgactggtggtggtaaaaccatattaggcacctatgcgatttcaacagcagccaag
gagtttttatccaaaagctatccaattacgctatggttagtgccaaccacaacgattcaa
cagcaaactgttgcagctttaaaaagcaatccagcttataccgagcacttaaacaaagca
tttgctaataatgtcagcgtttatgatatcgcagatgttaaccaaattcgttctcaagat
atcggcaataaagccattattgttgtttctactttagcgaatctaagagtaacaaaaacc
acagatcgcaaggtttatcagtatcacgaagactttgaacctcatttttctaaattaaca
agtgctaaccctgcatttgataaattagaaaaggtaactgaagatgatgtttcagaaaac
ggattaacagttagagacattggcaaagtcaaatactcgtttgcaaatttattggcgctt
tataacccactcgttattgtagacgaagcccacaatgctagaactccattaaccttcgac
acacttaaacgtgtttaccctgctgccattatggagtttaccgccacacctaatactact
ggaaccaatgcaagtaatattttatatcatgtgtctgctgctcagctaaaagctgaggag
atgataaaacttccaatcatcctaactgaacatgtaaatggttgggaagaagcagtaaga
gacgctgtactcaccagagaaaggttggcagtaaaagctcaaaaagatactgactatatc
cgaccgatagttttattacaggcagaaagcaagagcggtaaagtaactgtcgatgtttta
aagcagtgcttaatggaacaacaccatatcgatgaaagtaagatcgccattgctactggt
acacaacgagagcttgatggacttgatatttttcaacccgactgcccagttgagtttgta
attacaattgaagcattaaaagaaggttgggattgttcatttgcatacgtattttgctca
gtgaaacaagtttcttcaagtaaagatgctgaacagctattaggccgagttttgcgtatg
ccatatgcaaaacgaagagttattgaagacttaaatagagcctatgcccacttatcaacc
aatagcttggctcaagcagcaaaagaactcgcagataagcttatcgcaatgggctttgaa
gaactagaagtagcaacgtttcttcgtcagcaagacgctagtcagggtgaattatttgac
tcaagcggtaacaaaaagccagaatcaaaattgtcaccaacaacgctaatggtcgaagtt
aaggatgtggttgattcaacgttattaactgaagaagaccgaagcagtataaaggtatct
gaagttgaaggacgtaaagttgttactgtaactggcaaagtatcagacactttgaaaaaa
gctttggagaaagtggcaatagagcctaaaaaatcaatagaaagatctatcaagatgcat
aaccagagtgtttatgcggcacaatcgccatctgaaaatggcgctaaatttgccgtactt
ccaagattatgcgtaatgagccaaggtgagctagaacttgctgaaaaagaagtttttcta
gatgcttttggctggaatctattagattaccctgctgttctagactacaagcctactgaa
gataccactagcttctcagtagatttgcaggggaaaaaggttaaatatagctttgtagat
gatacacaaactctaaacttaaactttgctaatacagacgttactcaagatgaactagtt
ggctggctagacatggaatgtcgccaaagtgatgtaactcaaagagaaatgactggcttt
atgtcaaatgtcatcaatcacttgatgaaaaagcctgagctaactcttacaaccttgatt
agaaataagtacccattggcgaatgcgattcaagatttagtatctgagtacaggaaacaa
gcagcaaccaaaggttatcaacaagcattattttctaatgaatctgaagtattaacgact
tatgatttcagttatgaatttaaagccaataactatccagctcgtccaccatactatagc
ggtagctacgactttaataagcattactatcctcaaattgaagatatgaaatctagtggt
gaagagttcgattgtgctcaaattatagatttaatgcctgaagttaagcactgggtcaga
aaccttgtaaggcgtgaagaagcttcatttagcttgccattagcacatggtaacttcttt
cctgattttattgttgagcttaatgatggtcgaattttagtagttgaatataagggtgaa
gcttacaaaaccaatgatgactcagcagagaaacgtctagttggtgatttatgggctaag
catagtcaaggtaattgcttatttcttatggctgtaaagaaggatgacaacggccaaggc
gtcagacagcaactcttgaatataattagctaa

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