Shewanella woodyi: Swoo_0312
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Entry
Swoo_0312 CDS
T00676
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
swd02044
]
Swoo_0312
02035 Bacterial motility proteins [BR:
swd02035
]
Swoo_0312
Secretion system [BR:
swd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Swoo_0312
Bacterial motility proteins [BR:
swd02035
]
Pilus system
Pilus assembly proteins
Swoo_0312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF996
PASTA
Ribosomal_L6e_N
Motif
Other DBs
NCBI-ProteinID:
ACA84613
UniProt:
B1KNB6
LinkDB
All DBs
Position
complement(385999..387261)
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AA seq
420 aa
AA seq
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MATATASKKTNKKTAKAQPKVFTYEWKGLNRDGKKTSGELRGATIAEVKSQLKSQGVNPK
SVKKKAASLFKLGDPKVTAMDIAMVTRQIATMLQAGVPLVTTIEMLGRGHEKVKMRELLG
TILTEIQSGIPLSDALRPHRQYFDDLYVDLVAAGEHSGSLDAVFERIALYKEKAEALKSK
IKKAMFYPAAVVIVAIGVTTLLLLFVVPQFQEIFAGFGAELPAFTQLVIHISEALQASWY
IFAVAIIITVFLFRRAHLHSQTFRDKVDALILKIPAVGPILHKAAMARFARTLATTFAAG
VPLIDGLESAAGASGNAVYRNALLKVRSEVMSGMQMNVAMRTTGLFPDMLIQMVMIGEES
GSLDNMLNKVANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVAMYLPIFQMGKIVS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcaacagcaagcaaaaaaaccaataaaaaaacagctaaagcccaacctaag
gttttcacctatgagtggaaaggcttaaaccgtgatggaaaaaaaacctcaggagagctt
cgaggagcaacgatcgcagaggttaagagtcagctaaagtcacaaggagtcaaccctaag
tcagtaaagaagaaagctgcatctctgtttaaactcggcgaccctaaagttacagccatg
gacatcgccatggtgacacgccaaatagccaccatgcttcaagctggtgtacctctggta
acaaccatagagatgctgggccgaggtcatgaaaaagtaaagatgcgagagctgttaggt
actatcttaactgaaatacagtcaggtatcccgctctcagatgcgcttcgtccccacaga
caatatttcgatgacctctatgtcgatcttgtcgcagctggtgagcactcaggctctctc
gatgcagtatttgagcgcatagccctctataaagagaaagccgaggctctgaaatctaaa
attaaaaaagccatgttctacccagcagcggtagtcatcgttgcgatcggggtcacgact
cttttactcctgtttgtagtgccacagtttcaggagatctttgcaggcttcggtgcagag
ctccccgcattcacgcaactcgtcattcatatatctgaagcactgcaagcatcatggtat
atctttgctgttgctattatcatcactgtttttctctttcgccgcgctcacctgcactcg
cagactttcagagacaaggtagatgcacttattttaaaaataccagccgtaggtcctatc
ttacacaaagctgctatggcgcgatttgcaagaaccttagcaacaacctttgctgcaggt
gtccctcttatcgatgggcttgaatcagcagcaggagcgtcaggtaatgcagtgtatcgt
aatgcgctgctcaaagtgcgctctgaagtgatgtcgggaatgcagatgaatgtagcgatg
cggaccacgggacttttcccagacatgctaattcagatggtaatgataggtgaagagtca
ggctcattggataatatgctgaataaagtggctaatatctatgagatgcaggtagatgat
gctgtagatgggttatctagcctaatcgagcctattatgatggtggttattggcactcta
gttggtggcttaatcgtcgccatgtatcttcctatcttccagatgggtaagattgtcagc
tga
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