Shewanella woodyi: Swoo_0339
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Entry
Swoo_0339 CDS
T00676
Name
(GenBank) type IV pilus secretin PilQ
KO
K02666
type IV pilus assembly protein PilQ
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
swd02044
]
Swoo_0339
02035 Bacterial motility proteins [BR:
swd02035
]
Swoo_0339
Secretion system [BR:
swd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Swoo_0339
Bacterial motility proteins [BR:
swd02035
]
Pilus system
Pilus assembly proteins
Swoo_0339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
Secretin_N
AMIN
STN
type_II_gspD_N0
Phage-tail_1
Motif
Other DBs
NCBI-ProteinID:
ACA84640
UniProt:
B1KP70
LinkDB
All DBs
Position
433601..435649
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AA seq
682 aa
AA seq
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MGSSAATNTVLSVPSLSRLVGCLALFIIGISNAAASNRLVDVKYHAVVDHQLELQLVFED
EVDKPEIELNAEPAQIILLFKESISGLEKDKLPIKTVGVESVSINQTNGAMRLVVDLDKV
KAYKGKLSGNTYNITINDEVAERDDSSENPFVNSIQNIDFRRTAEGGGELIVKLNNNRVA
ANVEQVGAKLELKLYNTEIGSDFLYVMDVQDFATPVRSFETFKEELTSRVLIDISGEYEY
NYRQEEDLFKLSINKAERIVVAKEEEKYDGKSLSLNFQSISVRTVLQIIADYNNFNLVTS
DTVEGDITLRLDDVPWDQALDLILQTKGLDKRIEGNILMVAPREELAIRESQMLKDMQEV
KELSPLYSEYIQINYAKSADIAELLKSTDSSLLSSRGSVAVDERTNTLLIKDTEEIIENI
HRLIKILDIPIRQVLIEARMVTVKDDVSEDLGIKWGISDKQGSKGTSGSIGGAQDIANGI
IPSVNDRLNVNFPAPEAAASIAFHVAKLADGTILDMELSALEQENKGEIIASPRITTSNQ
KAAYIEQGVEIPYVEASSSGAATVSFKKAVLSLRVTPQITPDNRVILDLEISQDSQGKVV
ATPLGEVVSIDTQRIGTQVLVDHGETIVLGGIYQQNLISRVSKVPVLGDIPFVGFLFRST
SDKNERQELLIFVTPKIISEEI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttctgccgcgacaaatactgtattaagtgtgccatcgctatctaggctggtg
ggctgtttagccctttttatcattgggatctccaatgctgctgcgtctaatagattagtt
gatgttaagtatcacgctgttgttgaccaccaactggagcttcaattggtgtttgaggac
gaagttgataagcctgaaatagagcttaacgctgaacctgcacagatcatactgctcttt
aaagagagtatctctggactggaaaaagacaaactgccaattaagactgtaggtgttgag
tctgtgagtattaaccagactaacggtgcaatgaggctggtggtcgatcttgataaggta
aaggcatataaaggaaagctatctggcaatacctacaacatcacaataaacgatgaggtc
gctgaacgagacgatagtagcgaaaatccgtttgttaactcaatccaaaatatcgacttt
agaagaacggcggaaggtggcggagagttaatcgtcaagctgaataataatagagtcgca
gcgaatgtagaacaggtaggggctaagttagagcttaaactttacaacacagagatagga
tctgattttctttatgtgatggatgtgcaagattttgccactccagtaagaagcttcgaa
actttcaaagaggagttaacctcccgtgttcttatcgatatctcaggcgagtatgagtac
aactatcgccaagaggaggacctatttaaattaagcattaacaaagctgagcgcattgtg
gtcgctaaagaggaggagaaatacgatggaaagtctctttcactcaacttccaaagcatc
tctgtaaggactgtactgcagatcattgccgattataacaactttaatttagtgaccagt
gacaccgttgagggcgatattacccttagactggatgatgtgccatgggatcaagcgtta
gatttgattcttcaaactaaagggttagataagcgcattgaaggtaacattcttatggtg
gcgcccagagaggagttggccattcgtgagagccagatgcttaaagatatgcaggaggtg
aaagaactctctcctctctactctgaatatattcagataaattacgctaaaagtgccgac
attgctgaactgttaaaaagtactgattcaagtttattgtcttctcgaggcagtgttgct
gttgacgaaaggaccaatacattactgattaaagatacagaagagatcattgagaatatc
caccgattaataaaaatcttggacatcccaattcgccaagtattaattgaagctagaatg
gtcacagtgaaagatgatgtatctgaagatcttgggatcaagtggggaattagtgataaa
caaggtagtaaaggcacatctggcagtattggtggtgcacaagatattgctaatggcatt
attcccagcgtcaatgataggttaaatgtaaactttcctgcccccgaagcggctgcaagt
attgcatttcatgtcgcaaaacttgccgatggcaccatactcgatatggagttgagtgcc
cttgagcaggagaataaaggtgagattattgccagcccgcgcattaccacctcgaaccag
aaagctgcttacattgagcaaggtgtcgagatcccctatgttgaggcaagctcaagtggt
gctgcaaccgttagctttaaaaaagcggttttatcgcttagggttacaccacagatcacc
ccagataatcgtgtgattctggatttagagatttcacaagactctcaaggtaaagtggtt
gcgacaccattgggagaggttgtttcaattgatactcagaggatcggtacgcaagtgttg
gtcgatcatggtgagaccattgtattgggcggtatctatcagcagaacttgattagccgt
gtttctaaggtgcctgttttgggtgatattccctttgttggcttcctatttagaagcaca
tcggataaaaatgagcgacaagaactgctcatatttgtgacaccgaaaattatctctgaa
gagatttaa
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