Shewanella woodyi: Swoo_0440
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Entry
Swoo_0440 CDS
T00676
Name
(GenBank) transcriptional regulator, LysR family
KO
K02521
LysR family transcriptional regulator, positive regulator for ilvC
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swd03000
]
Swoo_0440
Transcription factors [BR:
swd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Swoo_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Xre-like-HTH
HTH_24
SBP_bac_11
HTH_23
MarR
GntR
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
ACA84738
UniProt:
B1KQ83
LinkDB
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Position
complement(540337..541209)
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AA seq
290 aa
AA seq
DB search
MDIKTIKLYLHLSESLHFSRTAQAMHVSPSTLSRAMQRLEDEVGAKLFQRDNRSVSLTSA
GVEYRHFAEQTLDHWSKLKTKIDPKQDLLRGRLNLYCSVTAAYSHLPGLLDSFRREHPLV
EIALTTGDAANAVNEVKNNRADVAIAALPDPFPDSLHFVKIDDVPLVIIAPTYRCQVQEL
LSESYIPWDRLPFIVPEHGPGRRRVDNWFKQLGLSPNIYAQVSGQEAIASMVALGCGVSI
TPDVVINNSPVRDRIQIIPSPIEIPPFELGCCCKTKSQKDPIISAFLKVL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggatataaaaaccataaagctctatctgcacctttctgaaagcctgcacttctcacgc
acggctcaggcgatgcatgtcagtccttcgacactcagtcgcgccatgcagaggctggaa
gatgaggtgggtgccaaactatttcagcgagataatcgcagtgtttcccttaccagtgca
ggcgttgagtaccgtcactttgccgagcagacactcgatcactggagtaagctcaaaaca
aagattgatcctaagcaggacctacttaggggcaggcttaacctctactgctctgtaact
gctgcctatagtcacctaccgggcttgctagacagtttcagacgcgaacatcccttagtg
gagatagccctaaccacaggtgatgcggcgaatgccgtgaatgaagtgaaaaataatcgc
gccgatgttgccatcgcagccctgccagacccttttccagatagcttacacttcgtcaag
atagacgatgttcctctcgtcattatcgcccccacctaccggtgtcaggttcaggaacta
cttagcgaatcttatattccctgggatcgacttccctttattgtgccagaacatgggccg
ggtagacgcagggtcgataattggtttaagcaattgggccttagcccaaacatctatgct
caggtttcgggccaggaggcgatcgcctctatggtcgcactagggtgtggcgtcagcatc
acgcctgatgtcgtgatcaataacagcccagttcgagatcgcatacagatcatcccctca
cccatagagatccccccctttgaacttggttgctgctgtaaaaccaagagtcagaaagat
ccaatcatctcggcttttttgaaagttttatag
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