KEGG   Shewanella woodyi: Swoo_0468
Entry
Swoo_0468         CDS       T00676                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
swd  Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:swd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:swd03400]
    Swoo_0468
Enzymes [BR:swd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Swoo_0468
DNA repair and recombination proteins [BR:swd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Swoo_0468
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ACA84766
UniProt: B1KQB1
LinkDB
Position
582259..584271
AA seq 670 aa
MKLNPGQNDAVHYVSGPCLVLAGAGSGKTRVIINKIAYLVEKCGYKARTIAAVTFTNKAA
REMKERVAQSMGRKQARGLWISTFHTLGLEVIKREHKVIGLKPGFSLFDDQDSLALLKEL
TEDEFDGDKDLLKNLMTAISNWKGDLVVPEQAIKLAKDEQSKLHAVLYQRYAKHMKAYNA
LDFDDLILIPTLLLRHNKEVRERWQQRIQYMLVDEYQDTNTSQYELVKLIVGERARFTVV
GDDDQSIYSWRGAKPQNLVLLGKDFPKLKLIKLEQNYRSSQRILRAANILIANNPHVYDK
ALFSELAYGEPLRVLIAANEEQEAERVIAEMIRHKFMGKTQFGDYAILYRGNHQSRLLER
SLMTNRIPYKLSGGTSFFGRAEIKDIMAYLRLVVNPDDDNAFLRVVNLPKRGIGPSTLER
LGNYANERHISMFEAIFQAELNHHLTPAAMGSLYKFGQFVVDTGEKATRGDPVDAVKHLI
RNINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLEGDELDEGMTLPEVVTRLTLRDM
MERNSEDEGGDQVQLMTLHASKGLEFPYVFMVGTEERILPHQTSIDEDNVEEERRLAYVG
ITRAQKELWFVLCRERRQFGETMRCEPSRFLMELPQDDLIWENRKQVQSEEQRQQSGRSN
IANLRDMFKK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgaagttaaaccccggacaaaatgatgccgttcactatgtatctggcccctgcttagta
ctggctggcgctggtagtggtaagacccgtgtgatcatcaacaaaattgcctatctggtt
gagaagtgcgggtataaggccagaacgattgcggcggtgacttttaccaataaagcggca
cgtgagatgaaggagcgtgttgctcaatctatggggcgaaagcaggcgcgaggcttgtgg
atctcaacctttcacaccttaggtttggaggtgattaagcgtgaacataaagtcatcggc
ttaaagcctggcttctcactgtttgacgatcaggactctttggcactactcaaagagctg
actgaagatgagtttgacggtgataaagatctgctgaaaaacttgatgacagccatctct
aactggaagggagatctggttgttcctgagcaggcgatcaagcttgcaaaggatgagcag
tctaagttacatgcggttttatatcagcgctatgccaaacatatgaaggcatacaatgcg
ctggattttgatgatcttattttaatccccactcttttgctgaggcataacaaagaggtg
agggagcgctggcagcaacgtattcaatatatgctggtggatgagtatcaagacactaac
accagtcagtatgagctggttaagttaattgtgggtgagcgagcacgctttaccgtggta
ggggatgacgatcagtctatctattcttggcgtggtgctaagccccaaaaccttgtgtta
ctgggcaaagacttccctaaacttaagttgattaagctggagcaaaactaccgctctagc
caacgaattttacgcgcggcgaatattctgatcgctaacaatcctcacgtttatgataag
gcgctgtttagtgagcttgcttatggtgaacctttaagggtgttgattgcagccaacgag
gagcaggaagctgagcgggtgattgctgagatgatccggcataagtttatggggaaaact
cagttcggcgattacgcgattctctatcgaggtaatcatcaatctcgtctgcttgagcgc
tcactgatgacgaaccgtattccctataagttaagcggtggtacctcatttttcggtcgc
gcagagattaaagatatcatggcctacttaaggctggtggtgaatcccgacgatgataat
gcctttttgcgtgtggtgaatttgccaaagcgtggtattggtccctcaacacttgagcgc
ttaggtaactatgctaatgagcgtcatatctctatgtttgaggcaatttttcaagctgag
ctgaatcatcacctgacacctgcggcgatgggttcactgtataagtttggtcagttcgtt
gttgataccggagagaaagcaactcgtggcgatccggttgatgcggtcaagcacctgatt
cgtaatattaattacgaagattatctgtatgaaaccagtactagcgccaaagcggctgag
atgagaatgaaaaatatctcagagttgtaccgctgggtgactgagatgcttgagggcgat
gagctagatgaggggatgactctgccagaggtggtcactcgcttaacactcagagatatg
atggagcgtaacagtgaagatgaggggggtgatcaggtgcagttgatgaccttacacgcc
tcaaaaggtctggagtttccctatgtgtttatggtgggaacagaggagcggatcttgcca
catcaaaccagtatcgatgaggataatgttgaggaagagcgccgcttagcctatgtgggg
atcactcgtgcccagaaggagctttggtttgtattgtgccgtgagcgacgtcagtttggt
gagacgatgcgctgtgagccgagccgctttttgatggagttgcctcaagatgatctaatt
tgggagaatcgtaagcaggttcagagcgaagagcaacgtcagcaatccggtaggtcaaat
attgcgaatctaagggatatgtttaagaagtaa

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