Shewanella woodyi: Swoo_0555
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Entry
Swoo_0555 CDS
T00676
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K15727
membrane fusion protein, heavy metal efflux system
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_0555
Transporters [BR:
swd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Swoo_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DZF_C
Motif
Other DBs
NCBI-ProteinID:
ACA84851
UniProt:
B1KR34
LinkDB
All DBs
Position
777891..779192
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AA seq
433 aa
AA seq
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MKHNTDLKIIEVNAITKAIAKAMFSAKRFGLFITLAAAISIPTTALAGDGHEHASIESGS
GEPHVEQIAHQNEESHDHDGESKVVADDGHGHGAGEAEEESHALVLSDEQLALANIQVEK
LAVATFSLEAVATATLVVDRDKTMTLAPQLDVRVEQRHVVPGQEVTQGQALLTLGGVAVA
QAQADYINAAAEWSRVSRMSKSAVSASRRLQAQVDAELKRAILEAMKMTSKQIAQLESNP
SNIGSYQLLAPINGRVQQDLAKLGQIVPAGTALMQLTDESHLWVEAQVTPAQSEKVSIGS
VALVRVGERSLEAKVIGRSHELDSVTRTEQILVSLENPGHVIHAGQFAELYLPDSIETGF
VLPDAALTRGGDGDWQVFIQDEDGFEAVEVDVVESQRGMNLVRGLAVGSQVVVSGAFFLA
SELAKSGFDIHNH
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacaatacagatttaaagattattgaagttaacgccattactaaggcgatcgcg
aaagccatgtttagtgcaaagcgttttggattatttatcactttagcggcagctatctct
attcctaccacggcactggctggcgatggtcatgagcatgcatccattgagagtggctca
ggcgagccccatgtggagcagattgctcatcaaaatgaggagagccatgatcacgatgga
gagtcaaaagttgtggccgatgacggtcatggccacggagctggtgaggctgaagaggag
tctcacgctttagtgctcagtgatgagcagttagcgctggccaatattcaggttgagaag
ttagccgttgccacttttagtttagaagccgttgccaccgcaaccttagtggtcgaccgt
gataaaaccatgaccttagcaccgcaactggatgtcagagtcgagcagcgtcatgtggtt
cctggacaagaggttactcaaggacaagcactgctgacactaggtggcgttgctgttgca
caggctcaggctgattacattaatgccgctgctgagtggagccgagttagccgtatgagt
aagagtgcagtgagtgcgagtcgccgccttcaagctcaagtcgatgctgagttaaaacgc
gcgattttagaggcgatgaagatgacctcaaagcagatagctcagctggagtcgaatccg
agcaacataggtagctatcaactgttagcgccgatcaatggccgtgttcagcaagattta
gcaaaattagggcagatagtgcctgcgggaacagcgctgatgcagctaaccgatgagtct
catctttgggttgaggcgcaagtgacgcctgctcagtctgaaaaggtgagcatcggcagc
gtggctttggtgcgtgtgggtgagagaagcttagaggcgaaagtgattggtcgctcccat
gagttagacagtgtgactcgcaccgagcagatcttggtgagcctagaaaatccaggccat
gtgatccatgccggtcagtttgctgagctttacctgcctgattctatcgaaacaggtttt
gtgttgcccgatgccgcgttaactcgcggtggtgatggagattggcaggtatttattcaa
gatgaagatggctttgaagctgtcgaagtggacgtggttgaaagccaacgtggcatgaat
ctggttcgtggattagccgttggtagtcaggttgtggtttccggcgcctttttcttagcg
tcagagctggctaagtctggtttcgatattcataaccactag
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