Shewanella woodyi: Swoo_0640
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Entry
Swoo_0640 CDS
T00676
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
swd
Shewanella woodyi
Pathway
swd03030
DNA replication
swd03430
Mismatch repair
swd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Swoo_0640
03430 Mismatch repair
Swoo_0640
03440 Homologous recombination
Swoo_0640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swd03032
]
Swoo_0640
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_0640
03029 Mitochondrial biogenesis [BR:
swd03029
]
Swoo_0640
DNA replication proteins [BR:
swd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Swoo_0640
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Swoo_0640
TLS (translesion DNA synthesis) factors
Other SOS response factors
Swoo_0640
Mitochondrial biogenesis [BR:
swd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Swoo_0640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Pro-rich
Motif
Other DBs
NCBI-ProteinID:
ACA84936
UniProt:
B1KDD5
LinkDB
All DBs
Position
887672..888349
Genome browser
AA seq
225 aa
AA seq
DB search
MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQPQERTEWHNIVMY
RRLAEVAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEINANEMQMLDSRGQGGGQQ
QGGYGQQQGQQNQYNAPQQQAPQQGGYAPKPQAAPQQQAPQQGGYQSQQQGGQQQQAPAY
APKPQAAPQQQAPQQRPAPQPQQQAAPQQNFTPDLDDGWDDDIPF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgtcaataaggtaattttggtcggtaatttgggtaaagaccctgaa
gttcgttatatgccaaatggcaatgccgtcgccaactttacagtggcgacgagtgagtct
tggaaagaccaacaaggtcagccacaagagcgtactgaatggcataatattgtcatgtac
cgtcgtctagctgaggttgctggtgaataccttaagaaaggttctaaggtttatatcgaa
ggtaaactgcaaactagcaagtggcaagatcaggcaaccggtcaagacagatataagact
gagatcaatgccaatgagatgcagatgctagacagtcgtggtcaaggcggcggtcaacag
caaggtggttatggtcagcagcaggggcagcagaatcagtacaatgcacctcaacagcaa
gcaccacaacagggtggttatgcgcctaagcctcaagctgctcctcagcaacaggcacct
cagcagggcggataccagtcgcagcagcaaggtggtcaacagcagcaagcgccagcttat
gcacctaagccacaagcagctccacagcagcaagcgccacaacagcgcccagcgcctcag
cctcaacagcaagctgcaccgcaacagaactttaccccagaccttgatgatggttgggat
gacgatatcccgttttag
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