Shewanella woodyi: Swoo_0701
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Entry
Swoo_0701 CDS
T00676
Name
(GenBank) anti-FecI sigma factor, FecR
KO
K07165
transmembrane sensor
Organism
swd
Shewanella woodyi
Pathway
swd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Swoo_0701
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FecR
FecR_C
DUF4880
UBA_MELK
DUF7439
Motif
Other DBs
NCBI-ProteinID:
ACA84996
UniProt:
B1KDJ5
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Position
958206..959285
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AA seq
359 aa
AA seq
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MSTIKQFYSKEELQEQAALWISRIDRGLSEVEIDSLSKWVSESKAHQDALFEMASYWDDL
SVLNELSVLFPLETAKNKSKWQYAAIAASFLLLSFVGGNWLLGGQISQHIWGAGEIYTQR
LESPVGKQTSFSLPDGTQVQLNTNSVVEVDYSSNYRQLTLVTGEAKFDVAKDRSKPFTVT
AGVQAFTALGTVFNVQKNDEQDMELVVTHGKVLVTSVDKSLEQIKESLSDIAEQSLPGLL
VSTGEKVVIAKNTSLAVEALPLEQMQRDLAWQQGMLIFEGEPLSQALDDVSRYTSVKFEI
VDPELSELKVAGYFKAGDVDGLLASLSSNFNIVHVKDSDNIIHLTAPSNTNPTKKLTIQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaattaaacagttttacagtaaagaggaacttcaagagcaagctgctttgtgg
ataagccgtatcgatagaggcttatctgaggttgaaatagattcactgtctaaatgggtt
agtgagagtaaggctcatcaagatgctctgtttgagatggcttcctattgggacgattta
agtgttcttaatgaactcagcgtgcttttccctcttgaaacagcaaaaaataagtctaaa
tggcagtacgcagccatcgctgcaagttttctgctgctctcttttgttggaggaaattgg
cttttaggcggccaaatctctcaacatatctggggggcaggtgaaatctacacccaaagg
ttagagagtcctgtcggcaaacaaacaagcttctctctacctgatggaactcaagttcag
ttaaacaccaatagtgttgtcgaggtcgattattcatcaaactatcgccagcttacttta
gtgactggtgaggctaaattcgatgtggctaaagataggtctaagccttttactgtcaca
gctggtgtgcaagcatttacagccctaggtacggtttttaatgttcagaaaaatgatgaa
caggatatggagttagtggttactcacggcaaagtactggtaacctctgtcgataagagc
ctagagcagattaaagaatcactcagtgatattgctgagcagagcttaccgggattgtta
gtttccaccggcgagaaggtcgtgattgctaaaaacaccagcttggccgttgaagctttg
ccgcttgagcagatgcaacgtgatctggcttggcaacaggggatgcttatttttgagggt
gagcctttatcccaagcattagacgatgtaagccgctatacgtcggttaaattcgagatt
gtcgatccagaactgtcagaactgaaagtggcaggctactttaaagcgggtgatgttgat
ggcttactggcctctttaagcagtaattttaacatagttcatgttaaagatagtgacaat
atcattcacttaactgcaccaagtaacactaatcctacaaaaaaattaacaatacaatag
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