Shewanella woodyi: Swoo_0760
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Entry
Swoo_0760 CDS
T00676
Name
(GenBank) putative phytochrome sensor protein
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swd03000
]
Swoo_0760
Transcription factors [BR:
swd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Swoo_0760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
GAF_2
Mg_chelatase
AAA
AAA_2
AAA_16
IstB_IS21
GAF_3
AAA_7
FAD_binding_9
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACA85055
UniProt:
B1KE69
LinkDB
All DBs
Position
complement(1033231..1034808)
Genome browser
AA seq
525 aa
AA seq
DB search
MHAQGSKMTLSQTELTRIALDITSGLSNRDRFSRLLDIIRQNLNCDAAALLAFQGQQFTP
LAINGLNEDVLGRRFLVEEHPRLEAIARAGDIVRFPSDSELPDPYDGLIPNQGDELKVHA
CIGLPLYANERLIGAITIDGFDPQQFDRFTNSELRNLSAIASVSLNNALMIDKLEKLALE
SQNSDSVMNVSMTDDVEMIGQSANMQALTHEINVVASTDLNVLILGETGTGKELVAKAVH
LGSERKKSSLVYLNCAALPESIAESELFGHVKGAFTGAISHRSGKFELADKGTLFLDEIG
ELPLNLQAKLLRVLQYGDLQKIGDDRSRKVDVRIIAATNKDLKQEILAGNFRADLYHRLS
VFPLLVPALRDRGEDISLLSGYFVERCRQKLGITSLTLTPASLHLLKQYQWPGNVRELEH
ALHRAAVLAKAQTSDGLTKIHPQHFDIVESNSLPQPPSLLGKNNKFSPDETGEATSLKRA
TDEFQANFILHTLNGHNGQWAATARALKVDPGNLHRLAKRLEIKS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcccagggatctaagatgacattgagtcaaacagagttaactcgaatcgcgctg
gatatcacctcaggcttatcaaatcgagatcgtttctctcgtcttctcgatattattagg
caaaaccttaactgtgatgcagccgccctcctcgcctttcagggacagcagtttaccccg
cttgccatcaatggcctcaatgaagatgtattaggcagacgatttttagtcgaggagcat
ccaaggcttgaagcgatcgcacgagctggagatatagtgaggtttccatcggatagtgag
ctacccgatccctatgatggtttgatcccaaatcaaggagatgaactcaaagtacacgct
tgcatcggtctccccttatatgccaatgagcgactaatcggtgccatcaccatcgacggg
ttcgatcctcaacagtttgaccgcttcaccaatagcgaactacgcaacctaagcgcaatc
gcttcggtatcactcaataatgccttgatgatagataagctagagaagctagctctggaa
tcacaaaactcagacagtgtgatgaatgtcagcatgacagacgatgtagagatgataggc
cagtcagccaatatgcaggctctcacccatgagattaatgtcgtcgcctctaccgatctc
aatgtactcatcttaggtgaaacagggacaggaaaggagctggtcgctaaagccgttcac
ttaggttctgagcgtaaaaagtcatccctcgtctacctaaactgcgcagcactacctgag
tcgattgccgaaagcgaactctttggccatgttaaaggggcattcacaggggccatcagc
catcgaagcggtaagttcgaactggcagataagggcacgctatttcttgatgagataggc
gagctgccacttaatctacaggcaaagctgctgagggtgcttcaatatggcgatctgcaa
aaaattggcgacgatcgcagtcgtaaagtcgatgttagaattatcgccgcaaccaacaag
gatctaaaacaggagatcttagccggaaactttcgcgctgatctctaccataggctcagc
gtattccctcttctggtgcctgcgctacgtgacagaggcgaggatatctctcttttaagt
ggttattttgtcgagcgttgtaggcaaaaactagggataacaagtttaaccttaaccccc
gccagtctgcacttgcttaagcagtaccaatggccgggaaatgtgcgggagttggaacat
gcgctgcaccgcgccgccgttttagccaaagcacaaaccagcgatggcctaacaaagatc
catccacaacattttgatattgtcgagtccaactcattgcctcagccccctagtttactc
ggcaaaaacaacaaatttagcccagatgagacaggcgaagccactagcttaaagcgtgcc
accgatgagtttcaggccaactttattctgcatactttaaatggtcacaatgggcagtgg
gcggcaaccgctcgtgcactgaaagtagacccaggcaacctacacagactagcgaaacga
ctggagataaagagctaa
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