Shewanella woodyi: Swoo_0820
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Entry
Swoo_0820 CDS
T00676
Name
(GenBank) transcriptional regulator, AraC family
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swd03000
]
Swoo_0820
Transcription factors [BR:
swd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Swoo_0820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ACA85115
UniProt:
B1KEW4
LinkDB
All DBs
Position
1105755..1106540
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AA seq
261 aa
AA seq
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MSDKSPNFPAFDSDSYPQKVVSLRATGGDHEAETPFHQHHKCQLVLALNGYVKCKIADAI
WMVPAYCAAWIPSQVPHSNRISSNADVRMLFVDPEISGMPDRSCTLSISPLLRELIVHLT
EQDQHYLDGSATARLVEVLIEQLRDMPTEHFDFPTPIESRLSAIASQLMTTPDDRRSVGE
WARQYAMSERTLARLTKQETGLTFGRWRGQLHIVLALQKLALGESVQRIAEDLGYESVSA
FITFFKKTLDKPPKQYMKLKN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaatcccctaactttccagcttttgattctgatagctatccgcaaaaagtg
gtctcgttgagagccactggaggagatcatgaagcggagacgccatttcatcagcatcac
aagtgtcagctagtactggctttgaatggctatgtgaagtgtaaaattgctgatgccatc
tggatggtgccagcgtattgtgctgcgtggatcccaagtcaagtaccacacagtaatcgt
atctctagtaatgctgatgtgcgtatgttgtttgtcgaccctgagataagcggaatgccc
gatagaagctgtactctgtcgatatctccactgctgagggagctcattgtccatttaacg
gaacaggatcaacactatcttgatgggagtgccacagccagattagttgaggtgttaata
gagcagttgcgagatatgcccactgaacatttcgattttccaacacccattgagtctaga
ctcagtgctatagcttctcaactcatgacgacaccggatgacagacgtagtgtcggtgag
tgggctaggcaatatgccatgagtgaacgtactttggccaggttgactaagcaggaaacg
gggctgacatttggccgttggagaggccagctacatattgtattggcattacagaagctt
gctttaggtgaatcggtgcagcggatcgcggaggatttaggttatgagtctgtaagtgcc
tttatcacctttttcaaaaaaacattagataagccaccaaaacaatatatgaagctaaaa
aactga
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integrated database retrieval system
