Shewanella woodyi: Swoo_0988
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Entry
Swoo_0988 CDS
T00676
Name
(GenBank) ABC transporter related
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
swd
Shewanella woodyi
Pathway
swd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Swoo_0988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_0988
Transporters [BR:
swd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Swoo_0988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
AAA_16
ABC_ATPase
AAA_22
AAA_29
AAA_24
DUF87
ATP-synt_ab
DUF815
AAA_15
AAA_23
Roc
MMR_HSR1
DUF973
Motif
Other DBs
NCBI-ProteinID:
ACA85281
UniProt:
B1KFW5
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Position
1299614..1301389
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AA seq
591 aa
AA seq
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MRPSLYFDGPVDKLNWHVLKLLWPYLFEYKKRVALALLCLIIAKVASVSLPFVLKSLVDT
LTEASPEQLISVPISLVIAYGSLRLLNTLISEVRDTLFGRVTERAIRRLGLSVFEHLHRL
DLEFHLERRTGGLSRDIERGTSGVNFLMRFMVFNIVPTILEIALVIGILFYNYGVAFAAI
TLGAVVAYVAFSVLATEWRTGFVREAAKADSHSNSRAIDSLLNYETVKYFNNETYEAQRY
DMALEEWEHAKRKNRLSLFALNAGQAFIISTAMTLMLALAGSHVVSGAMTIGDFVLINAF
MMQLFIPLNFLGFVYREIRGALANIERMFGLLDRKPLIEDKENAKKLAIGAGELTFEDVS
FSYDSRQILTSISFSILPGQKVAIVGDSGAGKSTIVKLLFRFYDVDSGSISLDGVNIDSL
TQHALRQSIAIVPQDTVLFNDSLLENIRYGRPGASDEDVAEVIKMAHLAHFVSSLPEGWD
TKVGERGLKLSGGEKQRVAIARAILKGSPLLVFDEATSSLDSHSEQAILTALKEVAKGHT
SLVIAHRLSTVVDADQIIVLSQGQIVETGDHSSLLKNNGLYSKLWTIQNQK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccctctctctatttcgatggacctgtagataaactaaattggcatgtgcttaaa
ctcctttggccctatctttttgagtataaaaagcgggttgctttggcacttttatgttta
attatcgctaaagttgccagtgtttctttaccctttgtgcttaaatctctagttgataca
ttgactgaagcatcacctgagcagttgattagcgtgcctatctctttggtcatcgcttat
ggatcactgcgcctattaaatacccttatttctgaagttagagataccctttttggccga
gtgactgagcgagctatacgtcgtttaggcctgtctgtttttgagcatctacatcgatta
gatctcgagtttcacctagagcgtaggactggaggtctatccagagacatagagcgagga
accagcggggttaactttttgatgcggtttatggtgtttaatattgtgccgacaatatta
gagatcgctctggtgataggtattctattttacaactatggggttgcatttgcggcgatt
acactaggagccgttgtggcctatgtagctttttccgtgttagccactgagtggcgaaca
ggctttgtgagggaagcggcaaaagccgactcacattcaaattctcgtgcaattgacagc
ttacttaattatgagacggtaaagtatttcaataatgaaacctatgaagctcaaaggtat
gacatggcactggaggagtgggagcatgcaaagcgcaagaatcgcttatctctttttgca
ctcaatgcgggtcaagcgtttattatctcaacggcaatgaccttgatgctcgccttagca
ggctctcacgtagtgagtggcgcgatgacgataggtgattttgtgttgataaatgctttt
atgatgcagttatttattccacttaattttttaggttttgtctatcgagagatcagaggg
gcattagccaatattgagcgtatgtttggtttattagacagaaagcctctgattgaagat
aaagagaatgcaaaaaagctggcgataggagcgggtgagttaacatttgaggatgttagc
tttagttatgactctcgtcagattttaacatcaattagcttttctattttaccgggtcag
aaagtggctattgttggcgatagtggtgctggcaaatcaaccatagtgaagcttctgttt
cgtttttatgatgtggatagcggaagcatcagtttagacggggtcaatattgactcacta
actcagcatgcacttagacaatccatagcgatagtgccccaagatacggtgctgtttaat
gactctttattagagaatattcgttatggcagaccgggtgctagtgatgaggatgttgct
gaggttattaagatggcacaccttgctcactttgttagctccttgcccgaaggctgggat
accaaagtgggagagagagggttaaagctttccggcggcgagaaacaacgagttgcgatt
gcaagagcgatcttgaagggctccccattattggtgtttgatgaggcgacatcatcactt
gatagtcactcagaacaggcgatattaaccgcattgaaagaggtggctaaggggcataca
agcttggtgattgcccataggttatcaacagtggttgatgccgatcagattatcgtgttg
agccaaggtcaaattgttgaaacaggcgaccattcatccctattaaaaaacaatggttta
tattccaaattgtggactatccaaaatcagaaatga
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