Shewanella woodyi: Swoo_1154
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Entry
Swoo_1154 CDS
T00676
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
swd
Shewanella woodyi
Pathway
swd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Swoo_1154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swd03032
]
Swoo_1154
Enzymes [BR:
swd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
Swoo_1154
DNA replication proteins [BR:
swd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Swoo_1154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
DnaG_DnaB_bind
Toprim_2
Toprim
Toprim_4
Toprim_3
DnaB_bind
NEMO
Motif
Other DBs
NCBI-ProteinID:
ACA85447
UniProt:
B1KHD9
LinkDB
All DBs
Position
complement(1488122..1489849)
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AA seq
575 aa
AA seq
DB search
MAIPRDFINELVARIDIVDLIDAKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCF
GCGAHGNVIDFVMEYDRLDFIDAIEDLAGQLGVEVPREKGTGPRRDEGLSRDLYQLMEEA
SLYFQNQLRQNNDKQKVLDYLAHRGLSNDVVEHFNIGFAPDGWDGLLSRYRQSQDAQDKL
LTAGMVIENDNGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKG
NELYGLYELKQKHRDPQKVLIVEGYMDVVALAQFGVDYAVASLGTSTTADQFQLLLRSAK
EVVCCYDGDRAGTEAAWRALETALPLLKPGNQVKFMFLPEGEDPDTMVRQVGKEVFENQI
EEAKLLPEFLFETLAAQYGSDKGTLAKQAIKLIEKIQDTVLQSLLLENLAYKLGMNSAEE
LKRKLGFSSKEQAKPLQTKALKGRGTPLRLAIALLVQNPLLGEGLPEQPALKHIKMAGIE
LLTLLLDITRVQVKNSAQLLEQFRGDEQLSTLKKLTQWDHQVADENLQLEFRKTLIWLNN
QYIEQRYQELSLKQNHTKEERIQLTKLIAVIKGLK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacctcgtgattttatcaatgagctagtagctcgaattgacatagtcgatcta
atcgacgcaaaagtacccctaaaaaaggcgggtaagaaccactctgcctgttgccctttt
cacagcgaaaaatccccctcttttaccgtaagccgggataaacagttctaccattgcttc
ggttgtggtgcacatggcaacgtcattgatttcgtcatggaatatgacaggctagacttt
atcgatgccattgaagatctcgctggacaacttggtgtagaagtcccaagagagaaagga
acagggccaagacgcgacgaaggattaagtcgtgatctgtatcaattaatggaagaagcg
agtctgtactttcagaatcagcttagacaaaataatgataaacaaaaggttcttgattat
ttagcacatcgaggactctccaatgacgtggtcgaacacttcaatattggatttgcaccc
gacggctgggacggtttactaagccgctaccgccaaagtcaggatgcacaagataaactt
ctcaccgctggtatggtgatagagaacgataacggcaaacgttacgatagatttagggac
agattaatgttcccaattcgtgacagaagaggccgagttatcggttttggtggtcgagtt
ttaggcgatggtacgccaaagtacttgaattctccagaaacgcccatatttcataagggc
aatgaactctatggtctctatgagctgaaacaaaagcacagagatccgcaaaaagtgctc
attgtcgaaggctatatggatgtggttgcactggctcaatttggtgtcgactacgccgtg
gcatcattaggtacatcgacaaccgctgatcaatttcagctattgctacgtagtgccaaa
gaggttgtctgctgttatgacggcgacagagctggaacagaggccgcttggcgagctctg
gaaacagcactccccctgctaaaaccaggtaatcaggtgaagtttatgtttctacctgaa
ggtgaagaccctgatactatggtccgtcaggtgggaaaagaggtatttgaaaatcagatt
gaagaagccaaactactgcccgagtttctatttgaaaccttagccgcacaatatggctca
gacaaaggcacgttagctaaacaggcaatcaagctgattgaaaagattcaagacacggtc
ttacaaagtttactgctagagaacctagcttataaactgggtatgaacagtgctgaagag
ctaaaaaggaagctgggcttctctagtaaagagcaagcaaaaccgcttcaaacaaaagca
ttaaaaggacgaggaaccccattgcgattagccatcgccttgctagtacaaaatcctctt
ttaggtgaaggtttgccagagcaaccagcactgaaacacataaagatggccggcatagag
ttgctgaccctgttattagacataacccgtgtacaggtaaaaaacagcgcacaactactt
gagcagtttaggggagatgagcaactcagcaccctaaaaaaactgacccaatgggaccat
caagtggcggatgaaaacctgcaactcgagtttagaaaaaccctgatctggttgaacaac
caatatattgaacaacgatatcaggaattgagtctaaaacagaaccatactaaagaagaa
aggatacagctgactaagcttatcgctgtcataaaagggctgaaataa
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