Shewanella woodyi: Swoo_1245
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Entry
Swoo_1245 CDS
T00676
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
swd
Shewanella woodyi
Pathway
swd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Swoo_1245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_1245
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Swoo_1245
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Swoo_1245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ACA85537
UniProt:
B1KI59
LinkDB
All DBs
Position
1583300..1583986
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AA seq
228 aa
AA seq
DB search
MLRGYVLHTRPFTDSSVLVNMLVDGQGRVDCVARLGSGKTSIKSILQPFQPLIFELSGRS
NLKNLIRVESASPAVPISGEVSFAGFYLNELMVRCISVDHGAEEIFFVYHKTLMAMAAGF
CQSQLRYFELSLLKEIGLMPTLNVDIAQDAIEADYYYRLLPDEGFVNALGPKTSHYSGEM
LLSLESHTLQAEHFKQAKHLMRLLLAPCLGDKPLKSRALFKTKSQYAK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtggatatgtgcttcatactcgcccttttactgactcaagtgtcttggtcaat
atgcttgtcgatggtcagggccgcgttgattgtgtggctcgcttaggcagtggtaaaacg
tctattaaaagtatacttcagccatttcagccgctgatttttgaactctctggccgtagc
aacttaaagaatctgatccgagtcgagtctgctagcccggcggtgcctatcagtggtgag
gtgagttttgcggggttttatcttaatgagctaatggtgcgctgtatcagtgttgaccat
ggcgctgaggagatctttttcgtttaccacaaaaccttaatggcaatggctgctggtttt
tgtcagagccagcttcgctattttgagttgagtctgcttaaagagataggtttgatgcca
acactcaatgtggatatcgcccaagatgcgatagaggcggattactactacagattgctg
cccgatgagggatttgttaacgccttagggccaaaaacatcacactacagcggtgagatg
ttgctgtcgctagagagccacacactgcaagctgagcattttaagcaggcaaagcatctg
atgcgcctgctattggctccctgcttaggcgataagccccttaagtctcgcgcgctgttt
aaaactaaatctcaatatgcaaaataa
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