Shewanella woodyi: Swoo_1281
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Entry
Swoo_1281 CDS
T00676
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_1281
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_1281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
TSP_3
OprF
Porin_4
DUF748
DUF2490
Opacity
Motif
Other DBs
NCBI-ProteinID:
ACA85573
UniProt:
B1KIS5
LinkDB
All DBs
Position
complement(1622751..1623854)
Genome browser
AA seq
367 aa
AA seq
DB search
MMNNTLKAVLLTSMLPFAANAAQELTPWYVGGGVGVNDYEPSCDLKTMKVCGKDDPYAWD
VFGGYLFNDYFGVELGYRDLGRGEWTDYANKRNDVGAKGMTLGLVGFMPLSQRWSLSAEA
GAMNYLLSNNKQYGTEYYSDSGVAPYFGVGVGYNITENLKLQAKYRRYENLEDDKWNTLD
MESNYWGLELSYRFGRTAPAAVVAPVVAAPVDSDNDGVTDDMDQCPNTPSTHQVDGNGCT
IYKETTEQRDVGSIQFANNSSVVKNESYQQIEKLANYMNQHPKSTVLISGHASDVGKAEY
NMMLSDKRANAVAKILVEKYGIAQDRVEAKGFGITQPIIEGSSPAANKANRRIEAHVTGV
KKEALIK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatacattaaaagcagttttgctgacatcgatgctcccttttgctgctaat
gcagctcaagagctgaccccatggtatgtgggtggcggtgttggtgttaacgattatgaa
ccaagctgcgatctaaaaaccatgaaagtttgtggtaaagatgatccttacgcttgggac
gtatttggcggttacctatttaacgactattttggtgttgaactaggttaccgtgatctt
ggtcgcggagagtggacagactatgccaacaagcgtaacgatgttggtgccaaaggtatg
acccttggtctagttggttttatgccactttcacaacgctggagtctatcggctgaagct
ggtgcgatgaactacctgctatcaaacaacaagcagtatggcactgagtactatagtgac
agcggcgtagcaccttactttggtgttggtgtcggttataacatcactgagaatttgaag
ctacaggctaaataccgccgctatgaaaacttagaagatgacaagtggaatacacttgac
atggaaagcaactattggggattagagcttagttaccgtttcggtcgtactgctccagcc
gcagtggtcgctccagtcgttgcagcaccagtcgattcagataatgacggtgtaactgac
gatatggaccaatgtccaaatacaccttcaactcatcaagttgatggtaatggttgtact
atctacaaagagacaactgagcagcgtgatgttggctcgattcagtttgctaacaactca
tcagtggttaagaacgaatcttaccagcagattgagaagctagcgaactacatgaaccag
caccctaaatcgacagtgctgatctcaggtcatgcctctgatgtaggtaaagctgagtac
aacatgatgctatctgacaagcgtgctaacgccgttgctaagatattggttgaaaaatat
ggtattgcgcaagatcgcgtagaagcgaaaggcttcggtatcactcaacctatcatcgaa
ggtagcagcccagctgcaaacaaggctaaccgccgtatcgaagctcacgtcacaggcgtg
aaaaaagaagccctaatcaagtaa
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