Shewanella woodyi: Swoo_1367
Help
Entry
Swoo_1367 CDS
T00676
Name
(GenBank) undecaprenol kinase, rRNA (guanine-N(1)-)-methyltransferase
KO
K02674
type IV pilus assembly protein PilY1
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
swd02044
]
Swoo_1367
02035 Bacterial motility proteins [BR:
swd02035
]
Swoo_1367
Secretion system [BR:
swd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Swoo_1367
Bacterial motility proteins [BR:
swd02035
]
Pilus system
Pilus assembly proteins
Swoo_1367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
ACA85659
UniProt:
B1KJI6
LinkDB
All DBs
Position
1721248..1724886
Genome browser
AA seq
1212 aa
AA seq
DB search
MSIFAPELTAICGQVCSRLTAIGRSTFSYRRFRLSSFLISSSAIYILFPHSILADDTELY
VHEASARSGARPQMLIIFDNSGSMNTTVVGAEKPYSSNAGGISGDNLGKQNKLYFTRGAT
AAEDQPNPSNTSETRHFSGVINSCESSWESLHEYGFYTGYFRGYSFTGSEGTWKELDDTG
TEGVIGIDCFEDIQDEKWANAVGVTSGLPVDGRGSSSQPRFYTYANGSSTEATKQRARER
AELTGFGTGRPLTIYTQDYLTWQHGTKEKANISRLEIAKNAVKSIILTTPSVDFGLAVFN
VNAWNEFERDGGRIISGLKENTSGVKSDLIEVIGDIQGKTNTPLCETLYEAYRYFSGLSV
DFAYKNTDLPGAGYYVSQQPQMDASVAKSGIYESPFKKCQNNASVVIITDGVPTKDAAAN
GFIDTLTGGADKYGSAATGDLNYLSAMSSWMNKYDLNTSEPGEQTVSTHTIGFSKGAASA
AALLKKTAEVGGGRYFDATNANLLQGSLQQVVSEALDTNSSFTSPAVASNNFNRTQSFEY
AYYSIFLPNKGPTWLGNLKKYRVTGKGEVVDKAGNPAIGLDGNIKSTACSFWTPSAVCSA
GGDGNEVEKGGALSAMQAADSRTIYSNLNTGLTELTVNNVTSTAGGTENLVNYLGVAEEQ
FPSLFGWAMGLDVDNNKGLESIPNPATNWRDDIMGDALHSKPLALNFGTKSTPDVRIVMG
TNHGFLHMFKDDSSSNSVTENWAFIPYELLPNLKTLRANVPTGVHSVYGVDGSPVAYTES
NDSGIEKAWLFFGMRRGGSSYYAIDISNPDNPSFMWKVDASSPGMSELGQSWSTPVVTTI
PGRSSESPVLIFGAGYSPSGKDGAGIGADDVKGRGVFILDAETGALVHQFGSASTGGTQL
PGISDSIPSSVAVLDSNADGATDRIYATDTGGNVWRMDMPSADTNKWSGFKFASLGGGVQ
SSDRRFYSAPAVAQTVITNIAEVTVENGGTTTKTKTKLNIPYDAVVVGSGHRAMPSDLSR
SDMFFTLQDRNVVSRSFKGGGSGVVIPTTLTLSELYDVTSTPPSDSDEQEQINFGKKRGW
YYSFSRTGEKNLSPATIVNGRVFFTSFVPPGDNSSSDQCISAGAGFLYNFDLHRGTRTHT
YIRTGEFVPDTPQLIVPPRVVNEGEEANPPNMYLIGIGAALPGNPPEGCDPSDLKCVGGG
LSTNRIYYYTSD
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttttgcccctgaattgactgcaatttgtggtcaggtttgtagccgtttaact
gctattggtcggtcaactttttcctatcgtcgatttagactttcatcttttttgatcagc
tcttctgctatttatattctgtttccgcactctatcttagccgatgatactgaactctat
gtgcatgaagcatctgcacgtagtggggctcggccgcagatgctgataatctttgataac
tccggcagtatgaatacaacggttgttggagctgaaaaaccttattcatcaaatgccggt
ggtataagcggcgataacttaggcaagcaaaacaagctctacttcaccaggggggccacg
gccgcagaagatcaacctaacccctccaacacatcagaaacacgtcacttttctggagtg
atcaatagttgtgagagctcttgggaatcactgcatgaatatggtttttatactggctat
ttcagaggttactcatttacaggctctgaaggaacctggaaggagctcgatgataccggc
actgagggggtgattggtatcgactgttttgaagatatacaggatgaaaaatgggccaat
gcagtgggagtgacaagtggtttacctgtcgatgggcgtggctctagctctcaaccgaga
ttttatacctacgctaatgggagctctactgaagcaactaagcagcgggcgcgcgaacga
gctgagctgactggatttggcacaggtcgccctttgactatctatactcaagactacctt
acttggcaacatggtactaaagagaaggcgaatatcagccgtttagagatcgcaaagaat
gcggttaaaagtatcattttaaccacaccgagtgtcgattttggcttagcggtgtttaat
gttaacgcgtggaatgagtttgagcgtgatggcgggaggattatctctggtctaaaggag
aatacctctggggtaaagtcagacttgattgaagttattggcgatattcaaggtaaaacg
aatacccctctttgtgaaacactgtatgaagcttatcgctatttttctggattaagtgtc
gacttcgcctacaaaaatactgacctaccaggagcgggttattacgtaagtcagcaacct
caaatggatgcttctgtggctaaaagtggcatttacgaatcgccatttaaaaagtgtcag
aataacgccagcgtggtgattattactgatggtgtgccgactaaagatgctgctgcaaat
ggtttcattgacacattaaccggaggagctgataaatacggcagtgcagcgacaggagat
ctcaactatctaagcgcgatgtcaagctggatgaataagtatgatcttaataccagtgaa
ccgggcgagcaaaccgttagcactcatacgataggttttagtaaaggggctgctagtgcg
gcagcacttttgaagaaaactgctgaagtaggcggaggacgctattttgatgccaccaat
gctaacctgttacagggctcactgcagcaagtggtcagtgaagcgttagatactaactct
agttttacttcgccggcggttgcgagtaataacttcaaccgaactcaatcatttgagtat
gcttactactccatattcttgcccaataaggggcctacttggcttggaaaccttaagaag
tacagagtgacaggaaagggggaagtggtcgataaagccggaaaccctgccattggtctt
gatggaaatattaagtccacagcttgctctttctggacaccttctgctgtatgtagtgct
ggtggtgatggtaatgaagttgagaaaggcggagccctgtctgcgatgcaggcggctgat
tctagaaccatctatagtaatttaaacactggattaactgagctgaccgttaacaatgtc
actagtactgcgggaggaaccgaaaacttagttaactacctaggcgttgctgaagaacag
ttcccctctctttttggttgggcaatgggcttagatgtcgataacaataaagggctggag
agcattcctaatccagcaactaattggcgcgatgacattatgggggatgcccttcattca
aaaccactagcacttaactttggtacaaagtcgacgcctgatgtgcgtattgtgatgggg
actaaccatggttttctgcatatgtttaaagatgatagtagcagtaacagcgtgactgaa
aattgggcttttattccttatgaacttctaccaaatctaaaaactcttagggcgaatgtg
cccacaggtgttcactctgtttatggcgttgacggttctcctgtggcctacaccgaaagt
aatgactcaggtatagagaaggcatggctcttctttggcatgcgccgaggcggcagtagt
tactatgctattgatatcagtaatcccgataatccaagctttatgtggaaagtggatgcc
agctcgccgggtatgtctgaattgggtcagtcatggtctactcctgtcgtcacaaccatt
ccaggtcgaagcagtgagagtcccgtgcttatttttggtgcgggttactcgccgtcgggt
aaagatggtgcgggtattggagccgatgatgttaaaggtcgcggggtctttattcttgat
gctgaaaccggtgcattggtgcatcagtttggctctgccagtacaggaggaacacaactt
ccagggatctcagacagtattccaagctcagttgctgtattagactccaatgctgatggg
gcaaccgatcgtatttatgcgacagatacaggcggtaatgtatggcgtatggatatgcca
tctgcagatacaaataagtggtctgggtttaaatttgccagtttaggtggtggtgttcaa
tcttctgacagacgtttctactcagctcccgccgtggcacaaaccgtcatcaccaatatt
gccgaggtgactgtcgagaacggtggaacaacaaccaaaacaaaaaccaagcttaacatc
ccctatgatgccgtggtggtaggtagcggacacagagcaatgccatcagatttgagccgc
tcagatatgttctttaccctgcaggatagaaatgtggtgagtcgctcctttaaaggtggg
gggagtggagtggttattccaacaacgttgaccctatcagagctctatgatgttacctca
actcccccttcagattctgatgagcaggagcagatcaattttggtaagaaaagaggttgg
tattacagtttctcccgtactggcgagaagaatttgtcaccagccaccatagttaatggg
cgagtattcttcacctcatttgtgccgcccggtgataactccagcagtgatcaatgtatt
agtgcgggagcgggctttctctataacttcgatcttcatcggggaacgcgaacacatacc
tacataagaacgggtgaatttgtgcctgatacgcctcagctcatcgttcctccacgtgtg
gttaatgaaggcgaagaagctaaccccccgaatatgtaccttatcggtattggtgcagcc
ctgcctggtaacccacctgaagggtgtgaccctagtgatttaaagtgtgtgggcggcggg
ttaagtactaatagaatttattactatacgtctgattaa
DBGET
integrated database retrieval system
