Shewanella woodyi: Swoo_1426
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Entry
Swoo_1426 CDS
T00676
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_1426
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_1426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACA85718
UniProt:
B1KJP5
LinkDB
All DBs
Position
complement(1802560..1805469)
Genome browser
AA seq
969 aa
AA seq
DB search
MFPNSKLTRSIRLAISVSLVTSLAIPVFAEENDENGDNIEKIAVTGSRIAKAELTQPAPI
VTLDSEELAKFGNSDLGSILAELPAIGATNTIIGNNNSNESAGISSADLRRLGANRTLVL
VNGKRHVAGEPGSSQVDLSTIPASLISRVEIVTGGASAIYGSDAVSGVINIILKDNYEGF
EFNARTAGSTESVGTQEHSFDILGGASIADGRGNITFFAGYDRTKEVLSTDIRQFDGWGT
IINPDSETETDGIPDRLRVPKVYSELISSTGIINAFGGPGGRWVFDNAGNPLRQVERVGT
NSFAFGSFPDGCDTCFDGESYENYIPGVERVTVSSSLNFDLNDNIELYSEFKFVRSDIKQ
QFQPSFRFGNVSVNVNDNAFLDEGLRTTLQDAGQETAVFAKFFDELGNRSASNTRELFRY
VGGFKGGFDLSETTLDYDLYYIYGETSNERKTLNDLIPDNFVAALDSVIDPATGLAACRS
QVPSAQGDDYTDPASVNGSDCVAYNPFGLGQSSEEARDWISADVTREDKITQQVIGGTIS
GDSEEFLELQGGPLAMVVGFEYREESSASITDEFTKAGFLTNAATPDSFGEYDVTEYFVE
VNVPLIKDLAFAHELTVDGAYRTADYSHAGKAEAWKVGMFYAPIEQVSVRGTYGSAVRAP
NISEAFSPRSPGFGRVADPCDADNINDDPDRVANCAALGIPSGFQANDNVSVDIISGGNS
ELKAETSTSFTGGLVWTPTFVDELSFTLDYYDIEIEDAIIEVTAQSIADNCVDATGGPDD
DFCSAVDRDPITHDVSLVRSGFLNAAALNTRGLEFQAAYNFDLATFNLPGELKFNLLGNQ
LLELERLEFQNRPDEINDEKGEVGDPELQFRLAIDYQLEDLNLSWATRYIDRVVTYDVSV
NGGSPEDLEPGYISSMTTHDLTATYHITDNVMINGGVRNLFDTLPPGYTNDALYDLVGRK
AFIGIKVSM
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaaactccaaattaacccgatcgattcgattggctatctccgtgagtctcgtt
acctcacttgcaataccggtttttgcagaggaaaacgatgaaaatggcgataacatcgag
aaaattgcagttacgggttctcgaattgcaaaagctgaactcacccaacccgctccaatt
gttacactggactcagaagagctagccaaatttggtaactcagatctaggcagcatactc
gctgagttacccgccattggcgcaaccaacacgattattggcaataacaacagcaatgaa
agcgcgggaataagctcggcagatctacgacgattaggcgcaaacagaaccttagtactc
gtaaacggtaagcgccatgttgctggtgagcctggctcatcgcaggtagatctatcgacc
attcctgcgagcctcatctcacgggttgaaatagtgacaggcggggcatcggcaatttat
ggttctgacgctgtatcaggtgttattaacatcattctaaaagacaactatgagggtttt
gagtttaatgctcgtaccgcaggttcaactgagagtgttggtacacaggaacactcattt
gatattcttggcggagccagcatcgctgatggacgcggtaatatcaccttctttgcaggt
tacgatcgcactaaagaggtgttatcgacagatatacgccaatttgatggctggggaacc
atcattaaccctgatagtgaaacagaaaccgacgggatcccagatcgattaagggtgcct
aaggtctattccgaactaatcagcagtacaggaataattaatgcttttggtgggcctggt
gggcgctgggtatttgataacgcaggaaacccattgagacaggtagagcgcgttggcacc
aatagctttgcttttggctcatttcccgacggttgtgacacctgttttgacggtgagtcc
tatgaaaactacattcccggcgtagaaagagtcacagtatcctcttcgctcaattttgat
ctaaacgataacatcgaactgtatagtgaatttaagtttgtaagatcagatattaagcag
cagttccagccctcatttcgcttcggcaatgtcagtgttaacgtaaatgacaatgctttt
ttagatgaaggcttaagaacaacgttacaagacgcaggtcaagaaacagccgtatttgct
aagttttttgatgaacttggcaaccgctcagcctcgaacactcgagaactattccgctat
gttggtggctttaaaggtggttttgacttaagtgaaaccactctagattacgatctatat
tatatctacggtgaaaccagtaacgaacgtaaaacccttaatgatctcatccctgataac
tttgtcgcggcattagattctgtcatagatcctgcaacaggtttagcagcttgccgaagc
caagtaccaagtgctcaaggagatgattataccgatccagcttcggtcaatggcagtgat
tgtgttgcctataaccctttcggcttaggccagtcttcagaggaagcacgagactggatc
tcagcagatgtcacccgtgaagataagatcactcaacaggtcatcggcggcacaatctca
ggagactctgaggagttccttgaactacaaggtggacctcttgccatggttgtcggcttc
gaataccgtgaagagagctcagcttcaattaccgatgaattcaccaaagcaggcttttta
acaaacgcagcaacccctgactcttttggtgaatatgatgtcacagagtactttgttgag
gtgaatgtcccgctaataaaagatcttgcctttgctcacgagttaactgtagacggtgct
taccgcacagctgattactcccatgcaggtaaagctgaggcttggaaagtaggcatgttc
tatgcccctattgaacaagttagtgtacgcggtacctatggttcagccgttcgcgccccc
aacatatcagaggcatttagtcctcgctctccaggatttggtcgtgtagcagatccctgt
gatgcagacaatatcaacgatgatccagatcgcgtagcaaactgtgctgcactaggtatt
ccatcaggatttcaggccaatgataacgtcagtgttgatatcatctcaggtggtaattca
gaattaaaagctgaaacttcaacttcatttactggcggtctcgtttggacaccgaccttt
gtcgatgagctatcatttacgcttgattactatgatattgaaattgaagatgcaattatt
gaggtaacggcacagagtattgccgataactgtgtcgatgccacaggtggtcccgatgat
gatttctgttcagctgtcgaccgtgacccaataactcacgatgtgagcctagttcgctct
ggattcttaaatgctgctgccctcaatactcgtggtttagaatttcaagccgcttacaat
tttgatctggcaacatttaaccttcctggagagttaaagtttaacttattgggtaaccag
ttactcgaactagagcgcctcgagttccaaaaccgtccagatgagatcaatgatgagaaa
ggggaagtgggagatcctgagctgcaatttcgtctagctatcgattaccagcttgaagac
ttaaaccttagttgggctacacgttacatcgacagagtcgtaacctatgatgtctccgta
aacggaggttctcctgaagatttagagccaggttatatcagctcgatgacaactcatgat
ctaacagcaacgtaccatatcaccgataacgtgatgattaatggcggagtgcgtaacctg
tttgataccttaccaccaggatacaccaatgatgccctttatgaccttgttggccgtaaa
gcctttatcggcattaaggtatccatgtaa
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