Shewanella woodyi: Swoo_1515
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Entry
Swoo_1515 CDS
T00676
Name
(GenBank) conserved hypothetical protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
swd
Shewanella woodyi
Pathway
swd00540
Lipopolysaccharide biosynthesis
swd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Swoo_1515
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
swd01005
]
Swoo_1515
Lipopolysaccharide biosynthesis proteins [BR:
swd01005
]
Lipid A
Swoo_1515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
ACA85803
UniProt:
B1KKG3
LinkDB
All DBs
Position
complement(1891797..1892792)
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AA seq
331 aa
AA seq
DB search
MNICHLRSISLFSSLLLCSQVYGGQWHLQLDNDIIFGSDGNYTNGMILGWESAAQDRRSE
LPTPLQWQRLFLFNQQEGEIAWGAKFNQRMWTPAEIEVATPQPDDRPYAGLLTIESHTAH
YGVNLSQKNWLSLGVMGPLSGAQQVQEFVHKFTDSSPPLGWQYQVENQVTIQLAYEVDAL
MLRRDAFNHALTGKTQWELSGFSHTQAGNFRSENELGVLFRWGNDLEHSFGRLSQHSGHL
GNLTSVKGFSNFIFYSRAFVGYRFNDLSLEGSLPYDSHLMLEHLQYGVKSGIIWSHSNGS
VSWSFNSYSQEYQNDKQSWHGYGSLTFSWNL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgccacttaaggtctatttcgttattcagttctctccttctttgctctcaa
gtctatggtggacaatggcaccttcagcttgataatgacattatctttggcagtgatggc
aactacaccaatggcatgattttaggctgggaaagcgctgcacaagataggaggagtgaa
cttccgactcctctccaatggcaaaggctttttctatttaaccaacaggagggagagata
gcttggggagctaaatttaaccaaaggatgtggacgccagcggagattgaggttgcaact
cctcagccagatgaccgcccctatgcaggactgctgactattgaaagtcatacagcccat
tatggagtgaatttatctcagaaaaactggctctctcttggtgttatgggccccttatca
ggagctcagcaggttcaagagttcgtccacaagttcactgactcctcacctcccttgggc
tggcaatatcaagttgaaaaccaagtaacgatacagctagcctatgaagtcgatgccttg
atgttaagaagagatgcatttaatcatgctcttacaggcaagacacaatgggagctgagt
ggatttagtcacactcaggctggtaattttagaagtgaaaatgaactaggggttctgttt
cgttgggggaatgatctagaacactcttttggccgcctaagccaacatagtggtcatctg
ggcaacctcacctccgttaaaggtttcagtaatttcatattctatagtagagcttttgta
ggctatagattcaatgatttaagcttagagggctcgctcccttatgattcccacctcatg
ttagaacacctacaatatggggttaagagcggtattatttggtcacactccaacggttcc
gtatcttggagctttaactcctacagtcaggagtatcaaaatgataaacaaagctggcat
gggtatggttcactgaccttcagttggaacctgtag
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integrated database retrieval system