Shewanella woodyi: Swoo_1776
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Entry
Swoo_1776 CDS
T00676
Name
(GenBank) cysteine desulfurase IscS
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
swd
Shewanella woodyi
Pathway
swd00730
Thiamine metabolism
swd01100
Metabolic pathways
swd01240
Biosynthesis of cofactors
swd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Swoo_1776
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Swoo_1776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_1776
03029 Mitochondrial biogenesis [BR:
swd03029
]
Swoo_1776
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
swd02048
]
Swoo_1776
Enzymes [BR:
swd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Swoo_1776
Transfer RNA biogenesis [BR:
swd03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
Swoo_1776
Prokaryotic type
Swoo_1776
Mitochondrial biogenesis [BR:
swd03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Swoo_1776
Prokaryotic defense system [BR:
swd02048
]
DNA phosphothiolation system
Sulfur modification proteins
Swoo_1776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ACA86060
UniProt:
B1KNI3
LinkDB
All DBs
Position
2198590..2199804
Genome browser
AA seq
404 aa
AA seq
DB search
MKLPIYLDYAATTPVDPRVAEKMMQCMTMDGIFGNPASRSHRYGWQAEEAVDIARNQVAD
LINADPREIVFTSGATESDNLAIKGVAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE
VTYLAPEANGLIPLATIESAMREDTVLVSIMHVNNEIGVIHDINAIGELCRSKKIIFHVD
AAQSAGKLPLDVQETKVDLLSISAHKMYGPKGIGALYVRRKPRIRLEAAMHGGGHERGMR
SGTLATHQIVGMGEAAAIAKADMEADNARIAGLRDRLWNGVKGIEETYINGDVEQRYCGS
LNVSFNFVEGESLMMALKDLAVSSGSACTSASLEPSYVLRALGLNDEMAHSSIRFSIGRF
TTEEEIDHAIETINKSIDSLRDMSPLWEMFKDGVDLEQVQWAHH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcctatctacttagattatgctgcgactacgccggttgatccccgtgttgca
gaaaaaatgatgcagtgcatgactatggacggcatctttggtaacccggcatcccgttct
caccgttatggttggcaagctgaagaagctgtcgatattgcccgtaaccaagttgctgat
ctaattaatgccgatcctcgtgagatcgtatttacatccggtgctacagagtctgacaac
ctagcaattaaaggtgtggctcacttctaccagaagaaaggcaagcacatcattaccagt
aagactgagcacaaagcggtactcgatacttgtcgtcaacttgagcgcgaaggttttgag
gtgacttaccttgcaccagaagctaacggccttattccattggctactattgagtctgca
atgcgtgaagacactgttcttgttagcatcatgcacgtaaacaatgagattggcgtgatc
cacgacattaatgccattggcgaactttgccgtagcaagaagattatcttccatgtcgat
gctgcgcaaagtgcaggtaagttaccgcttgatgtccaggaaaccaaagtcgatctactt
tcaatttcagcacacaaaatgtacggccctaaggggattggtgcattgtatgttcgtcgt
aagccacgtattcgtctagaggcggctatgcacggtggtggacacgagcgtggtatgcgt
agtggtacgttagcgactcaccaaattgttggtatgggagaagctgctgcaatcgcgaaa
gctgatatggaagccgataatgcacgcattgctgggttacgtgaccgtctttggaacggt
gttaaaggcatcgaagagacttacattaacggtgatgttgaacaacgttactgcggcagt
ctcaatgtcagcttcaactttgttgaaggtgagtcattgatgatggccctgaaagatctg
gctgtttcatcgggttcagcttgtacttccgcaagtttggaaccaagttatgtgcttcgt
gcactaggcttaaatgatgagatggcacatagctcaattcgattctcaatcggtcgtttt
acgactgaagaagagatcgaccacgcaattgaaacaattaataaatctattgatagtttg
cgggatatgtctccactttgggagatgtttaaagatggtgttgaccttgaacaggttcag
tgggctcaccattaa
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