Shewanella woodyi: Swoo_2067
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Entry
Swoo_2067 CDS
T00676
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
swd
Shewanella woodyi
Pathway
swd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Swoo_2067
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swd01007
]
Swoo_2067
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_2067
Enzymes [BR:
swd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Swoo_2067
Amino acid related enzymes [BR:
swd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Swoo_2067
Transfer RNA biogenesis [BR:
swd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Swoo_2067
Prokaryotic type
Swoo_2067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ACA86351
UniProt:
B1KRE4
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All DBs
Position
2534838..2537225
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AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPNISRDELSHQITMAGLEVDGVDGVAGEFSGVIVGEVVECGQHPDAD
KLRVTKINVGQDELIDIVCGASNCRLGIKVAVAMVGAVLPGNFKIKKAKLRGEPSFGMLC
SYGELGIDIESDGILELPSDAPLGTDLREYLSLDDAVIDVDLTANRADCLGMAGLAREVG
VLNRQAVTEPTWEAVVPSIDDSVQVDLQAPASCARYLGRVVKNINVKAQTPLWMQEKLRR
SGIRSIDPIVDITNYVLIEFGQPMHAFDLAKLEGDIQVRMGNGAEKLTLLDGNEITVPAD
SLVISDEKKPLALAGVFGGEFSGVGAETQDIMLECAYFAPLAILGKTRRLGLHTDSSHRF
ERGVDPELQHKVMDRATRLVLDICGGEAGPVCEAKSEENLPKPVGITLRRSKLDRILGHH
ISDAEVTEILQRLGFNVAVSEGQWEVVTATYRFDMAIEEDLIEEVARIYGYNNIPNTAPI
ASLSMPDHKESDISLKRVRSMLVSRGFQEAITYSFVDPKMQALVHPEQEAMILPNPISVE
MSAMRLSTLTGLLSAVGYNQSRQQNRVRLFESGLRFVPDENADSGVRQQAMLGAVISGAQ
NDEHWSMESKTVDFFDLKGDLEAILGLTVSDEEFTFRSAAHPALHPGQCAEILRNDRVIG
VIGAVHPSLEKPFGLNGKTIVFELELDALLHARLPLAQTVSKFPANRRDIAILVDEEVFA
GDVVKMIRKVGQNQLVGINLFDVYQGKGVEPGQKSLAIALTLQDNTRTLEEKEIAEMVDS
VVDALKTEFNALLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaatcttggcttcgtgagtgggtcaatccaaacattagccgtgacgag
ttgtcacatcaaattacgatggctggtctagaggtcgatggcgtagatggtgttgccggt
gagttctctggcgttatcgttggtgaagttgtcgagtgcggtcaacatcctgacgccgat
aaattacgcgtgactaagattaatgtcggtcaagatgagttaatcgacattgtctgtggt
gcatctaactgtcgtcttggcatcaaagtggctgtggctatggttggtgctgtactgccg
ggtaattttaagatcaagaaagccaaactgcgtggcgagccatcttttggcatgctttgc
tcttatggtgagttaggtatcgatattgaaagtgatggtattttagagttgccatcagat
gctcctcttggtaccgatcttcgtgagtacctaagtcttgatgatgcggttatcgacgtt
gatttaacggctaaccgtgccgattgtcttggtatggctggacttgcccgtgaagtgggt
gtacttaatcgccaagcggtaactgagccaacatgggaagcggttgttccctcgattgat
gacagtgttcaggtagatcttcaggcaccagcatcatgtgctcgctatttaggccgagtt
gttaagaacatcaatgtgaaggctcaaaccccactttggatgcaggaaaaactgcgtcgt
agtggcattcgctctatcgatcctatcgttgatattaccaattacgtgttgattgagttt
ggtcagccgatgcatgcctttgatcttgcaaaacttgagggtgacattcaagtacgtatg
ggaaatggcgctgagaagctcacactgctcgatggtaacgagatcacggttccagcggac
agtttagtcatcagtgacgaaaagaagcctctagcgcttgctggggtgtttggaggtgaa
ttctctggtgttggtgctgaaactcaagatattatgctggaatgtgcgtattttgcgcca
cttgctattttgggtaagactcgccgtttaggtttgcatactgactcatcgcatcgtttt
gagcgtggtgttgacccagagttgcaacataaagtgatggatcgtgccacgcgtctagtg
cttgacatctgtggtggtgaagcgggtcctgtctgtgaagctaagtcagaagagaacctg
cctaagccagttgggatcacactgcgccgcagcaagttagaccgtattttaggccatcat
atcagcgatgctgaagtgacagagattcttcaacgcctaggtttcaatgtcgcggtaagc
gaaggccaatgggaagtggtaacagcaacttaccgttttgatatggctatcgaagaggat
ttgattgaagaggtggctcgtatctacggatataacaatatccctaacacggcccccatt
gcttctttgagcatgcctgatcataaagaatcagatatcagcttaaagcgagttcgtagc
atgttggtgtctcgtggtttccaagaagctatcacctacagcttcgttgatcctaagatg
caggcactggttcatccagagcaagaagcgatgattttaccaaatcctatctcagttgag
atgtcggcaatgcgcctatcaacactaactggtctgttgagtgcggtagggtataaccaa
agtcgtcagcagaatcgtgttcgcctttttgaatctggattacgctttgttccagacgaa
aatgctgattctggcgtgcgtcagcaggcgatgttaggtgcggttatttctggtgctcaa
aacgacgaacattggtcaatggagtcaaaaactgtcgactttttcgaccttaagggtgat
cttgaggcaattctcggcttgacagtatccgacgaagaatttacttttagatcagcagcg
cacccagcgttacatccggggcaatgtgctgaaatattaaggaatgatagagtaatcggt
gttattggtgcagtacatcctagtttagagaagcctttcggactcaatggtaaaacaatt
gtttttgaacttgaattagatgctttgttgcatgcacgtcttccgctagcccagactgta
tctaagtttcctgccaatcgtcgagacatcgccatcttagttgatgaggaagttttcgcc
ggtgatgttgtaaaaatgataagaaaagttggccaaaatcagttggttggcataaactta
tttgacgtataccagggtaaaggtgttgagccgggccaaaaaagcctagcgattgcactt
acattacaagacaacactcgtacacttgaagagaaagagatagctgagatggttgattca
gttgttgacgctcttaagaccgagttcaacgcattgttgagggattaa
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