Shewanella woodyi: Swoo_2227
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Entry
Swoo_2227 CDS
T00676
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
swd
Shewanella woodyi
Pathway
swd00020
Citrate cycle (TCA cycle)
swd00620
Pyruvate metabolism
swd00720
Other carbon fixation pathways
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01120
Microbial metabolism in diverse environments
swd01200
Carbon metabolism
Module
swd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
swd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
swd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Swoo_2227
00620 Pyruvate metabolism
Swoo_2227
09102 Energy metabolism
00720 Other carbon fixation pathways
Swoo_2227
Enzymes [BR:
swd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Swoo_2227
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
ACA86508
UniProt:
B1KED0
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Position
2732235..2733749
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AA seq
504 aa
AA seq
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MSKEVIIKQADLIESVADSLQYISYYHPKDFVDAMSEAYEREESAAAKDAIAQILINSRM
SAEGKRPLCQDTGIVTCFVKVGMGVKWDKTDMTVQQMVDEGVRQAYNNPDNPLRASIVAD
PAGSRKNTKDNTPSVVHIDMVPGDHVEVAIAAKGGGSENKSKMAMLNPSDDVAAWVEKTL
PTMGAGWCPPGMLGIGIGGTAEKAAVMAKESLMDPVDIHELQARGAETTEEKMRLDIFER
SNKLGIGAQGLGGLTTVLDIKIKTAPTHAASKPVVMIPNCAATRHVHFHLDGSGPAVLTP
PSLEDWPVITREAGENTRRVDLNTVTQAEIEQWKSGDTLLLNGKMLTGRDAAHKRIQSLI
ESGEGLPEGVDFKGKFIYYVGPVDPVGSEVVGPAGPTTATRMDKFTDLMLEKTGLMGMIG
KAERGPATVASIKKNKAVYLMAVGGAAYLVSKAIKTSRVVAFADLGMEAIYEFDVKDMPV
TVAVDSDGVNAHETGPAIWKIKLN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagaagtcatcattaagcaagccgatcttattgagagcgttgccgattcccta
caatatatctcatattaccaccccaaagatttcgttgatgctatgtctgaggcctatgag
cgtgaagagagcgcagcggccaaagatgcaattgcacagatcctgatcaactcacgtatg
tcggccgaaggcaaacgtcctttatgccaagatacggggattgtgacctgttttgtaaaa
gtaggaatgggcgttaagtgggacaagacggacatgaccgttcaacagatggtcgatgag
ggcgtcagacaagcttacaataatccagataacccacttcgtgcatccattgttgccgat
ccagctggcagccgcaaaaacaccaaagacaatacgccatcagttgtccatatcgatatg
gtacctggcgatcatgttgaagtagccattgcggctaaaggtggcggttctgaaaataaa
tctaagatggcaatgttaaatccatcggatgatgtggctgcttgggttgagaaaacatta
cccaccatgggtgctggctggtgcccaccgggaatgctaggcattggcattggcggtacc
gctgaaaaagccgctgtgatggcaaaagagtcactaatggatcctgttgatatccatgag
cttcaagctagaggcgcagaaaccacagaagagaagatgcgtttagatatctttgagcgc
tctaataaacttggtattggagcgcagggcttgggtggattaaccactgtgctcgatatt
aaaattaaaacggcgccaactcatgcggcatctaagcctgtggtgatgatcccaaactgt
gctgctacgcgtcatgtacattttcatcttgatggcagcggccctgctgtactgactccg
ccatcactggaagattggcctgtgatcacccgtgaagcgggagaaaacacgcgccgtgtt
gatctaaacactgtcactcaagctgagatagagcagtggaagagcggtgatacgttgctg
ttaaatggcaagatgctcacgggtcgagatgcggcgcataagcgtattcaaagcctgatt
gagtcaggtgaaggtttgccagagggggtcgactttaaaggtaaatttatctattacgtt
ggtcctgttgatcctgttggcagtgaagttgtaggacctgctggcccaacaacggcgact
cgtatggataagtttaccgatctgatgctagagaagactggattgatgggcatgataggt
aaagctgagcgtgggcctgctactgtcgcttctattaagaaaaataaagctgtttacctg
atggctgtcggtggcgctgcttatttagtgtcgaaagcgattaaaacctctcgtgttgtc
gcttttgccgatctaggcatggaagctatctatgagtttgatgtgaaggatatgcctgtc
actgttgcagttgattcagatggcgtgaatgcccatgagacgggcccagctatctggaaa
attaaactgaactag
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