Shewanella woodyi: Swoo_2312
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Entry
Swoo_2312 CDS
T00676
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swd03032
]
Swoo_2312
03036 Chromosome and associated proteins [BR:
swd03036
]
Swoo_2312
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_2312
DNA replication proteins [BR:
swd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Swoo_2312
Chromosome and associated proteins [BR:
swd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Swoo_2312
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Swoo_2312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Phage_lambda_P
Motif
Other DBs
NCBI-ProteinID:
ACA86591
UniProt:
B1KF50
LinkDB
All DBs
Position
2842056..2842343
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIEKLAMRQSQLSAKEVESAIKEMLEQMAQTLEGGDRIEIRGFGSFSLHFRAPRT
GRNPKTGTSVELDGKYVPHFKPGKELRERVDAINV
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatcgaaaaactcgccatgaggcagtcgcagctgtcggctaaa
gaagtggaaagtgcaattaaagagatgttagagcagatggctcaaacattagaaggcggt
gatcgcatagagatccgtggctttggtagcttttctctccatttccgtgcaccgcgtact
ggccgtaatccaaaaactggaacctcagttgaactggatggcaaatatgtaccgcacttt
aagccaggtaaagaactgcgcgaacgtgtcgatgcgataaacgtttaa
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