Shewanella woodyi: Swoo_2322
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Entry
Swoo_2322 CDS
T00676
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
swd
Shewanella woodyi
Pathway
swd00061
Fatty acid biosynthesis
swd00071
Fatty acid degradation
swd01100
Metabolic pathways
swd01212
Fatty acid metabolism
swd02024
Quorum sensing
swd04146
Peroxisome
Module
swd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Swoo_2322
00071 Fatty acid degradation
Swoo_2322
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Swoo_2322
09145 Cellular community - prokaryotes
02024 Quorum sensing
Swoo_2322
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
swd01004
]
Swoo_2322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swd04147
]
Swoo_2322
Enzymes [BR:
swd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Swoo_2322
Lipid biosynthesis proteins [BR:
swd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Swoo_2322
Exosome [BR:
swd04147
]
Exosomal proteins
Exosomal proteins of breast milk
Swoo_2322
Exosomal proteins of breast cancer cells
Swoo_2322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACA86601
UniProt:
B1KF60
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All DBs
Position
2852857..2854428
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AA seq
523 aa
AA seq
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MSQLFNSKIEDLASLIESSMSKYGKAPAFECFGQTLTFEELERLSGALGAWLQHSSGLVA
GDRIIIQLPNINQFPIAVFAALRAGLVVVNTNPLYTPREMLHQFTNSGAKGIIILQDLLG
KLSEVIESTEIGTVIVTHPLDLISKKLASPEWGVGMMDAIALGETYELKPRFNKNLDDTC
VIQYTGGTTGLSKGACLTHRSILSNVGQFFERIDEKLEEQKEIFVCPLPLYHIYAFVVNM
IMLFSKGNLNLLIPNPRDLDALVKSIGEHKITGFSGINTLFVGLCQHPGFKGLDFSSLKM
TFSGGSALSMHAAQTWQNLTGCTVSEGYGLTEASPVVCMNEPGNEQLASVGRPLIGTQVE
IWDEHDRVLPIGEQGQIVVRGPQIMKGYWLLPDETNKAMAKDGFYRTGDVGEIRPNGCIK
IVDRLTDMIIVSGFNVYPNEVEEVLVSHPSINEAAVVGEPDSKSGERVCAYVTVLDKSIE
MKTLLDYCREMLTAYKIPKRIIFMESLPKTTVGKILRRELRQT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttattcaacagtaagattgaagatttagccagcctgattgagtcaagtatg
agtaagtatggtaaagcacctgcctttgagtgttttggtcaaaccctcacttttgaagag
ttggaacgtctatctggtgcgttaggtgcatggcttcagcatagttccggactcgttgcc
ggtgacagaattattatacaactgcctaatattaaccaattccccattgcagtatttgca
gcgctacgtgctggactcgtggtggtcaataccaacccactttataccccgcgtgagatg
ctacatcagtttactaattcaggcgctaaggggatcattatcctgcaagaccttctgggt
aagctgtctgaagtgatagagagcacagagattggtactgttatagtcacccacccgtta
gatctcatctcaaagaaacttgcttcaccagaatggggagtagggatgatggatgcgatc
gcgcttggggaaacctatgagcttaagcctcgatttaacaaaaatttagatgatacttgc
gttatccagtacacaggcggtactacagggctatccaaaggggcttgcttaactcatcga
agcattttaagtaatgtagggcagttctttgagcgtatagatgaaaaacttgaagagcaa
aaagagatctttgtttgtcccttacccctttatcatatctacgcttttgtggtgaatatg
atcatgttatttagtaagggaaacctaaatttacttatccctaatcctagggatctcgat
gccttagtgaagagcattggggagcataagatcactggatttagtggcattaacacctta
tttgtcggtctatgccagcatccaggatttaaaggattagattttagctcactaaagatg
actttttctgggggatcggcgctgtcaatgcatgcggctcaaacctggcaaaatctcaca
ggctgcacggtaagtgaaggttatggtctcacagaagcttcaccggttgtttgcatgaat
gaacctggcaatgaacagcttgcctctgtggggagacccttaatcggtacgcaggtggaa
atttgggatgagcacgatagggtgttgcctattggtgagcagggtcagattgtcgttagg
ggacctcagatcatgaaaggatattggctgttacccgatgagactaacaaagcgatggca
aaagatggcttttatcgcactggcgatgtgggtgagatcaggccaaacggctgtattaaa
attgtggatcgtctaaccgatatgatcattgtttcaggcttcaatgtttaccctaatgag
gtggaggaggtgttagtcagtcatcctagcatcaacgaagcggctgtcgttggtgaaccc
gatagtaagtctggggagcgagtttgtgcttatgttactgttttagacaaaagtatagag
atgaaaaccctgcttgattactgccgtgagatgctaaccgcctacaaaattcctaagcgc
attatctttatggagtcattgccaaaaacaaccgttggtaaaattctacgccgagaactg
aggcaaacttaa
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