Shewanella woodyi: Swoo_2415
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Entry
Swoo_2415 CDS
T00676
Name
(GenBank) PP-loop domain protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_2415
Transfer RNA biogenesis [BR:
swd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Swoo_2415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ACA86693
UniProt:
B1KFY6
LinkDB
All DBs
Position
complement(2961054..2962013)
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AA seq
319 aa
AA seq
DB search
MSVDLSAQQVTRMKKLQKKIRSEVGKAISDYNMVEEGDRIMCCLSGGKDSYAMLDILLDL
QQRAPIKFEIVAVNLDQKQPGFPEHVLPAYLDSLGVAYHILEKDTYSIVRDKIPEGQKTC
SLCSRLRRGTLYGFAQKIGATKIALGHHRDDIIETLFLNMFFAGKQKAMPPKLLSDDGAN
MVIRPLAYAREKDIAEYAELKGFPIIPCNLCGSQENLKRASVKEMLNQWDVEHPGRIESI
FTAMQNTSPSQGVDREQFDFISLTRDANAPLKGEVAESDLPAFDFVDVSNNGHIDLDAAS
KAKRVNPEHKINIVSTYTP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgatctatctgctcaacaagttacccgaatgaaaaagcttcagaaaaaaatc
agaagcgaagtcggtaaagccatctccgattacaacatggttgaagaaggcgatcggata
atgtgctgcctttccggtggtaaagatagttacgccatgcttgatattctattagacctt
caacaacgtgcgcccattaagtttgagattgttgcggtaaatttagatcagaaacaacct
ggttttccagagcatgttttgccagcctacctagatagtttaggggtggcttatcatatc
ttagagaaagacacctactctattgtcagagataagatccctgaaggtcaaaagacctgc
tctttgtgttcacgtcttcgtcgtggaaccctttatggtttcgcacaaaaaattggtgca
actaagattgcactgggacaccacagagacgatattattgagaccttgttcctgaatatg
ttttttgctggaaagcagaaggcgatgccacctaagctactttccgatgatggtgccaat
atggtgatccgtcctctggcgtacgctcgcgaaaaagatattgccgaatatgcagagctt
aagggcttccctattattccgtgtaatctatgcggttctcaggaaaacctaaaacgtgct
tcggtgaaagagatgctcaatcagtgggatgttgaacatcctggtcgcatcgagtctatc
tttaccgcaatgcaaaatacctcaccttctcaaggtgtagatagagagcagtttgatttt
atctcactgactcgcgatgcgaatgcaccgctaaaaggggaagtggctgagtctgatctt
cccgcgtttgattttgttgatgtttcaaataacggtcatatcgatcttgacgcagcaagc
aaggcgaaacgcgttaatcctgagcacaaaattaatatcgtgagtacttatacgccttaa
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