Shewanella woodyi: Swoo_2565
Help
Entry
Swoo_2565 CDS
T00676
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_2565
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_2565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACA86842
UniProt:
B1KGX3
LinkDB
All DBs
Position
complement(3136282..3138813)
Genome browser
AA seq
843 aa
AA seq
DB search
MIRTSQHSRNKLATAIKLGLIASVSSTTFTVSNTAFAEEAGADVERIAVTGSRIQRQDME
TASPVTVIGADEIRAEGFTTVDELLQAQTSMGGKAVGSSTNNGADGVAQVDLRGMGSQRT
LVLLNGRRMVNSGSGANSSVDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKD
FEGFQVDVQGGMTDKSDGENGEISALYGFNTDTGNYTFGAAYSERKGVIQSDRDWTDPGN
SSFIPNGSLGGKVKDENGNWVDRSEGYDFTQDSFYQTPSKRYSLFANMTQELGDDIVMTG
DILYTKRKSNQQLAPQPANIMLDVCAPGDDPMTCLELDQDMIDAGISPDKNGQVNYRKRM
NDVGPRIYNQDTDTWRISAGLEGSLDINTGMNWDASYTYGNNKAKTGVENSINANLMADA
IYADQDPWLTGKPMTDQDVLNSVSYDEEADGGNEQHVFSAGLNGELFDLDAGAVAFAIGA
EYRYESGYYNPDPIVVAGESTAAQQDPTDGSYNVISVFQEVSVPFTDKLTGEFALRFDDY
STFGNASTWKIGLTYEATDDLMLRTVAATGFRAPSVSELYGGNSGSYDYLVDPWGNEKDP
QILVNRTSDEDLKPEESESYTAGLVYSPSYVDGLSLTVDYWRFKVENAITRLDTQAGIDA
CYGGDASACETFNIGADGDLSNLTNSLTNVGFQDTSGVDFNLAYNFEALNLDWVVSNDTT
YLLNFEQDGKEYTGTIDGNFGAYAEVRNNFSIKAGQDDWSVMYFNRYIGEMDDLATGDTV
DSVLYHNLSATYFINDDWMLSAGVKNFTDEDPSKVSNGSDGGTVPEVYDVIGRTYFAGVT
MKF
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgataagaacatcacagcattcacgtaataaattagcgacagcaattaaactaggttta
attgcatcagtatcaagtactacatttacagtatcaaatactgcttttgcagaagaagcg
ggtgcagacgttgaacgcattgcagttacaggctcccgcatccagcgccaagacatggaa
actgcatcgccagtaaccgtaattggtgctgacgaaattcgtgccgaaggttttactacc
gttgacgaattgctacaagctcaaacatctatgggcggtaaagcagtaggttcaagcact
aacaacggcgcagacggtgtagctcaagtagaccttcgcggaatgggctcacagcgtaca
cttgtattgctaaatggccgccgtatggtgaactcaggttcaggtgcaaacagctctgtt
gaccttaactctatccctgtagcaatgattgcacgtgttgaaatcttaaaagatggcgca
tcagctgtttatggctcagacgctattgctggtgtagtaaacattatcactaagaaagac
ttcgaaggtttccaagttgacgttcaaggtggcatgaccgataagagcgatggcgaaaat
ggtgagatcagcgccctttatggctttaacacagataccggaaactacacatttggtgcc
gcatattcagagcgtaaaggtgtaattcagtctgatcgcgactggacagatccaggtaat
agttcatttattccaaacggctctttgggcggtaaagtgaaagatgaaaatggtaactgg
gtagaccgctcagaaggctacgactttacacaagacagcttctaccagacaccaagcaag
cgttacagcctatttgctaacatgactcaagagctaggtgatgacatcgtaatgaccggt
gacattctatataccaagcgtaagtcaaaccagcagctagcaccacagcctgccaacatc
atgctagatgtttgtgcccctggtgatgaccctatgacttgcctagagcttgatcaagat
atgattgatgcaggcattagcccagacaagaacggtcaggttaactacagaaaacgtatg
aatgacgtgggtccacgtatttataatcaggacactgatacatggcgtatctctgcaggc
cttgaaggttcgttagatatcaatacaggtatgaactgggatgcttcgtacacttacggt
aataacaaagcaaaaactggcgtagagaactctattaacgctaacttgatggccgatgct
atctatgctgaccaagatccttggttaactggcaagccaatgactgatcaagatgtactc
aatagtgtttcttatgatgaagaagctgacggtggtaacgagcagcatgtattctcagca
ggccttaacggtgaactgtttgacctagatgcaggtgccgttgcattcgctatcggtgct
gagtatcgctacgagagcggatactacaatccagatccaattgttgtagcgggtgaaagt
actgcagcgcagcaagatccaacagatggtagttacaatgttatctcggtattccaagaa
gtgagcgtgccgtttactgataaactaaccggtgaattcgcactacgttttgatgactac
tcaacatttggtaatgcatctacttggaagattggtcttacttatgaagcaactgatgac
ttaatgctccgtacagtagcggctacaggcttccgtgcaccaagcgttagtgaactatac
ggtggtaactcaggttcttacgactacttggttgatccatggggtaacgagaaagaccca
cagatcttagtcaaccgtacttcagatgaagatcttaagcctgaagagtcagagtcttat
actgctggtttagtttactcgccaagctatgttgacggtctatcgttaactgttgactac
tggcgctttaaagttgaaaacgccattacgcgtctcgacacacaagctggtatcgatgct
tgttatgggggagatgcatcagcatgtgaaacctttaatattggtgcagacggtgatttg
tctaacttgactaactcactaactaacgttggtttccaagatacaagcggtgttgacttt
aacttagcctacaactttgaagcattaaaccttgattgggttgtaagcaacgataccacc
tacttgttgaatttcgagcaagacggtaaagagtacactggcacaatcgatggtaacttc
ggtgcatatgcagaagttcgtaacaacttcagcattaaagctggccaagacgattggagc
gttatgtacttcaaccgttatatcggtgaaatggatgatttagcgacaggtgatactgta
gattcagttctgtaccacaacctgtcagctacatacttcatcaacgatgactggatgtta
agcgctggtgttaagaactttactgatgaagatccatcaaaagtatctaacggtagtgac
ggtggaacagtaccagaagtttatgacgttattggtcgtacatactttgctggtgtaaca
atgaagttctaa
DBGET
integrated database retrieval system
