Shewanella woodyi: Swoo_2607
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Entry
Swoo_2607 CDS
T00676
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
swd
Shewanella woodyi
Pathway
swd03030
DNA replication
swd03430
Mismatch repair
swd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Swoo_2607
03430 Mismatch repair
Swoo_2607
03440 Homologous recombination
Swoo_2607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swd03032
]
Swoo_2607
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_2607
Enzymes [BR:
swd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Swoo_2607
DNA replication proteins [BR:
swd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Swoo_2607
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Swoo_2607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACA86884
UniProt:
B1KHJ9
LinkDB
All DBs
Position
complement(3189640..3190368)
Genome browser
AA seq
242 aa
AA seq
DB search
MNIVSSSKRQIILDTETTGMNQGAGAIFLGHRIIEIGCVEVINRRLTGRHYHEYINPQQI
IDEEAIEVHGITNEFVAHKPKFAEVAQSFIEFIDGAEIVAHNANFDVSFMDHEFSLLQPV
GPKTADICPILDTLEIAKFLHPGQKNNLDALCKRYGIDNSRRDLHGALLDAEILADVYLM
MTGGQTKFNLSSEKEGSESGGIRRLSQSRNKLKVITATADELAMHEERLNLVAKSGQCIW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtatcaagttcaaaacgccagatcattctcgataccgaaaccacaggtatg
aaccaaggagccggtgccatctttttgggacaccgcatcattgagattggttgtgtcgag
gtgattaatcgacgccttactgggcgtcattatcatgaatatattaaccctcagcagatc
attgatgaagaagcgatagaggtccacggtattaccaacgaatttgttgcccataagcca
aagttcgccgaggtagcccaaagttttatcgaatttattgatggtgcagagattgtggct
cataacgctaacttcgatgttagctttatggatcatgagttctctcttcttcaacctgtt
gggcctaagactgccgacatctgccccattctggataccctggagatcgctaagtttctg
catcccggtcagaaaaataacctagatgctctgtgtaagcgttatggcattgacaattca
cgtcgtgatcttcacggcgctttactcgatgcggagatattagctgacgtttacctgatg
atgacaggtgggcaaaccaagtttaatctttcaagtgagaaagaggggagtgaaagtggt
gggatcaggcgtttaagtcaaagtcgtaataaacttaaagtgatcacggctacggccgat
gaattagctatgcatgaagaaagattaaatttggttgcaaaatcaggacaatgtatttgg
cgaggatag
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integrated database retrieval system
