Shewanella woodyi: Swoo_2703
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Entry
Swoo_2703 CDS
T00676
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_2703
Enzymes [BR:
swd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Swoo_2703
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Swoo_2703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACA86979
UniProt:
B1KIC8
LinkDB
All DBs
Position
3308496..3309203
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AA seq
235 aa
AA seq
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MSHTIKQKSQSKRATTTSKRGDQKRASWFNKNQPKSKAPQMRTGKGKTVEPVIVLFNKPF
DVLCQFTDEQGRQTLKDFIPIPGVYAAGRLDRDSEGLLLLTNDGKLQSKLTEPKKKTFKT
YWAQVEGAPDEAQLDLLRKGVELKDGMTLPAKISIMSQPTVWERVPPIRERKAIPTTWLE
IQICEGRNRQVRRMTAHIGFPTLRLIRYKIGQWSLDDLSPGQYQSIDMKNKAVCQ
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcacacaattaaacaaaagtctcaatcaaaaagagcgaccacaacctccaaaaga
ggcgatcagaagcgagcttcttggtttaacaaaaatcagccaaaatctaaagctcctcaa
atgcgtactggtaaaggcaaaactgttgaacctgttatcgttctttttaataagcccttt
gacgtgctgtgccagtttaccgatgaacagggacgtcaaacattaaaagactttatccct
attcccggcgtatatgcagcaggaagactcgacagggacagtgaaggactgttactgctt
accaatgacggtaaacttcaatctaaactcactgagcctaaaaaaaagacattcaaaacc
tattgggcgcaagttgaaggcgcaccagatgaagctcaattagatctgttacgtaagggc
gtcgaactaaaagatggcatgacgctacctgcaaaaatcagcatcatgtcgcaacctact
gtttgggaacgtgttccaccgatccgagagcgtaaagctatcccaaccacttggttagag
atccagatctgtgaagggcgtaaccgtcaagtaagaagaatgactgcccatatcggtttt
ccaacgctcagactcattcgctataaaataggtcaatggagtcttgatgatctcagtcca
ggtcaataccagagtattgatatgaaaaataaagccgtatgtcagtaa
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