Shewanella woodyi: Swoo_2705
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Entry
Swoo_2705 CDS
T00676
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
swd
Shewanella woodyi
Pathway
swd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Swoo_2705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_2705
Enzymes [BR:
swd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Swoo_2705
Transfer RNA biogenesis [BR:
swd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Swoo_2705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
SAWADEE
DUF7411
ATP_bind_3
PAPS_reduct
Motif
Other DBs
NCBI-ProteinID:
ACA86981
UniProt:
B1KID0
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All DBs
Position
3309839..3310972
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AA seq
377 aa
AA seq
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MAIIEPTAALIEPTANKKVIVGMSGGVDSSVSAYLLLKQGYQVEGLFMKNWEEDDTDEYC
AAADDLKDAQAVCDKLGIKLHTVNFASEYWDNVFEYFLAEYKAGRTPNPDIICNKEIKFK
AFLEFADDILDADYIAMGHYVRRSDDSGQSQMLRGIDGNKDQSYFLYTLSHEQVSRSLFP
VGELEKSEVREIAKEMGLITHDKKDSTGICFIGERKFTDFLSTFLPAQPGNIETAEGEVI
GTHQGLMYHTLGQRKGLGIGGMKNSNDDPWYVVDKEMDRNVLVVGQGGNHPRLMSTGFYA
DQLHWVDRIGPDNGAKITVKTRYRQRDVACSLHYDGEDRVKVLFDEPVAAVTPGQSAVFY
DAEVCLGGGIIDSLIRE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgataatcgaaccaactgcggcattaatcgaacccactgctaataaaaaagtcatt
gtcggcatgtccggcggtgttgactcatcagtttcggcttacttgttacttaaacagggc
tatcaagtcgaaggtcttttcatgaaaaactgggaagaagatgacaccgatgaatattgt
gctgctgcagatgaccttaaagacgcgcaagcggtatgcgataagctgggcataaaactg
cacacagtaaactttgcctctgaatattgggacaatgttttcgaatactttctagcagag
tacaaggcaggcagaacgccaaatccagatattatctgtaataaagagataaaatttaag
gcatttcttgagtttgcagatgatattttagacgctgactacatcgccatggggcactat
gttcgccgtagtgatgacagcggtcaaagccagatgctacgaggtatcgacggcaataaa
gatcaaagctattttctctatacactgagccatgagcaagtttcccgctcactatttcct
gtcggtgagcttgaaaaaagtgaagtcagggagattgccaaagagatgggacttatcacc
catgataaaaaagatagtactgggatctgttttatcggtgagcgtaagttcactgacttc
ctcagcaccttcctgcctgcacagcctggtaatattgagactgctgaaggtgaagtcatt
ggaacccatcaaggcttgatgtatcacacccttggacagcgtaaaggtctagggatcggt
ggaatgaaaaacagtaacgatgatccttggtatgtggttgataaagagatggaccgcaat
gtattagttgtgggtcaaggtggtaaccaccctcgccttatgtcgacgggtttttatgct
gaccaacttcactgggttgaccgtattggtcctgacaatggcgcaaaaattacagttaag
actcgttaccgtcaaagagacgtagcctgcagcttacattacgatggcgaagacagggta
aaagtactctttgatgaacctgttgcagcagtgacaccaggccaatcagccgttttttat
gatgccgaagtatgcttaggcggcggtatcatcgattcactaatcagagaataa
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