Shewanella woodyi: Swoo_2777
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Entry
Swoo_2777 CDS
T00676
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_2777
Enzymes [BR:
swd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Swoo_2777
DNA repair and recombination proteins [BR:
swd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Swoo_2777
Prokaryotic type
Swoo_2777
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Phage_tail_C
Motif
Other DBs
NCBI-ProteinID:
ACA87053
UniProt:
B1KJ33
LinkDB
All DBs
Position
complement(3392804..3394213)
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AA seq
469 aa
AA seq
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MVLLWIRRDLRCFDNPALMDAVANGCRYALFISTPQQWDLHHEAPIKLDFIRRHLLQLEQ
QLFELGVKLVHLTSTDFSAQSELLIRFCREHHIHRVLANSEPEFNEQQRDRSLLSSGLDI
EFYDCDVIAPRGRVLNQSGEMFKVFTPFKKAWLKHVREFGVECIGRPQGLSKPLSPPARD
LIGELNSSSSLINSSSLSTSWPLADEVMEKVIPHFFSAKVCDYKERRDFPAIKGTSGLSP
YLAIGALSPRTLYQQLLARYPQLIEDDNHPAFCWLNELIWRDFYKHLLFHYPRLSKQTSF
LEKYAKTQWPGTQAEFDAWSKGETGYPLVDAAMRQLVRTGWMHNRLRMVVASFLTKHLLV
DWRQGEQFFMSHLIDGDHSANNGGWQWAASTGCDAQPYFRVFNPILQSQKFDPNGDFIRK
YLPELNDIPTKYIHFPHDYMAKHGVSDTYWPPVVEHKAARLRAIAFYKG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtattactttggatccgcagggatctaagatgctttgataaccctgctttaatggat
gcggtggcaaatggctgccgctatgctctgtttatttcaaccccgcagcagtgggacttg
caccacgaagcgccgattaagctagattttatccgcaggcatctactacaactggagcag
cagctttttgagcttggagttaagcttgttcacctaacgtcaacagattttagcgcgcaa
agtgagctgttaattcgtttttgtcgtgaacatcatatccaccgtgtacttgctaattca
gaacctgaatttaatgagcagcaaagagatagatcactactttcaagtggcttagatatt
gagttttatgattgtgatgttatcgctccaaggggaagagtgctcaatcaatccggcgag
atgtttaaggtgtttaccccttttaaaaaagcctggcttaaacatgtacgggagtttgga
gttgagtgcatcggtaggcctcagggtttaagtaagcctctgtcaccccccgctcgtgat
ttaataggggagttgaattcgtcatcctccttaataaactcttcatcattatctacttct
tggccattggcggatgaggtaatggagaaggtcatcccgcatttttttagtgcaaaagtg
tgtgactataaagaaaggagggattttcctgccatcaaaggtacatctggtttatctccc
tatttggcgattggcgcattgagtccaaggaccctatatcaacagcttttggcacgctac
cctcagttaattgaagatgataaccaccctgcattttgttggcttaatgaattgatttgg
cgtgatttttataagcacctgctgtttcattaccctagactatctaaacaaacttctttt
cttgaaaagtatgcaaaaacccagtggccgggtacgcaagcagagtttgatgcctggagc
aaaggtgagactggttacccgctggtggacgccgctatgaggcagcttgttagaacaggc
tggatgcataatcgattgcgcatggtcgttgcgagttttttaactaaacatcttttggtg
gactggcgacagggtgaacagttttttatgtcgcatctcatcgatggcgatcactctgcc
aataatggtggttggcaatgggctgcaagtactggctgtgatgctcaaccctattttcgg
gtttttaatccaatacttcaaagccaaaagtttgatccaaatggtgacttcattcgtaag
tatctaccagagcttaatgatatacctacaaaatatattcatttcccccatgactatatg
gcgaagcacggggtatcagatacttactggcctccagtagtagagcataaagccgctaga
ttgagggctatcgcattttataaggggtaa
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