Shewanella woodyi: Swoo_2890
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Entry
Swoo_2890 CDS
T00676
Name
(GenBank) conserved hypothetical protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_2890
Enzymes [BR:
swd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Swoo_2890
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Swoo_2890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
PrmA
Motif
Other DBs
NCBI-ProteinID:
ACA87165
UniProt:
B1KJX8
LinkDB
All DBs
Position
complement(3535632..3536540)
Genome browser
AA seq
302 aa
AA seq
DB search
MQLFFDELSKATLTDEVNRLFHGRGGVYPGMEHLCLDWFPPVLLLTSFKPLAEDELAAAT
QGLTQFWAAQRGDEPMNLVYQYRSGGQTHTDLIAGSVPEQHTVCENGAKFHVHLLRGQNH
GLFLDMKNGRQWVREQAQDKKVLNLFAYTCAFSVAALQGGADSVVNIDMSKGALSIGKQN
HLLNGFDSGARFFGHDIFKSWGKLTKLGPYEMIIADPPSNQRGSFVATKDYSRLLKRLPE
LLTPDGEVLLCLNAPELGIEFLMEQVKEYSPSLEFVEQLENPPVFLDVDLNKALKVLRYR
RV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcagttattttttgatgaattgagtaaggccacgttaaccgatgaggttaatcgactt
ttccatggccgcggtggtgtttatcctggtatggagcacctgtgtttagattggtttcca
ccggtacttttactgactagctttaaacctttagcagaagatgagttggcggctgcgact
cagggcttaactcagttttgggcggctcagcgtggcgatgaaccaatgaatctggtttat
cagtatcgcagtggtggccaaactcataccgatcttatcgcaggttcggtgcccgagcag
catactgtgtgtgagaatggcgctaagtttcatgttcacctcttaagaggtcagaatcat
ggcctgtttttagatatgaagaatggtaggcagtgggtgcgggagcaggcacaagataag
aaggtgttgaacctgtttgcttatacctgtgctttctctgtggctgcattgcaaggggga
gctgacagtgtcgttaatatcgatatgagtaagggggctttgtctatcggtaaacagaat
catctactcaatggtttcgactctggagctcgtttttttggtcatgatatttttaagtcc
tggggaaaactgactaaacttgggccttatgagatgatcattgccgatccaccaagtaac
cagcgcggtagctttgtggcgacgaaagactactcccgcttactaaaacgcttgccagag
ctcttaacacctgatggtgaagtcctcctgtgcttaaatgctccagagcttggaattgag
ttcttgatggagcaggtgaaggagtatagtccttcacttgagtttgttgagcaacttgaa
aatccaccagtttttttagatgtcgacctcaacaaagccttgaaagtattgcgttatagg
cgggtgtaa
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integrated database retrieval system
