Shewanella woodyi: Swoo_2907
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Entry
Swoo_2907 CDS
T00676
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_2907
Enzymes [BR:
swd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Swoo_2907
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Swoo_2907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACA87180
UniProt:
B1KJZ3
LinkDB
All DBs
Position
complement(3556154..3557017)
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AA seq
287 aa
AA seq
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MSEKLQKVLARAGHGSRREMEAWIAAGRISIDGEIANLGDRVEADVKIRIDGRAVSIKSE
EDLVCRVIAYHKPEGEICSRKDPEGRPTVFDRLPKTRDSRWVAVGRLDINTSGLLLFTSD
GELANRLMHPSNEVEREYAVRTFGEVTDACIQRLRTGVTLEDGPAHFDKVKAAGGEGMNK
WWHVSLAEGRNREVRRLWESQEVQVSRLIRIRYGMIELPKSLPRGGWVELELEQVNYLRQ
TAGLAIENRTLLGTDKHSVARAKVKSAKIKRAVNKHKVNAAKNTRQR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaagtcttggcccgtgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggtcgaattagtatagatggtgagatcgcaaatctaggtgat
cgcgtcgaagcggatgttaagatcagaatcgacggacgtgcggtgtcaattaagtctgaa
gaggatttagtttgccgtgtgatcgcttatcacaaaccggagggcgagatctgtagtcgc
aaagatcctgaaggtcgtccaacggttttcgaccgtttacctaagacccgtgattcacgt
tgggttgcagttggtcgtctggatatcaacacctctggtttactgctgtttacatcggat
ggtgagctggctaaccgcttaatgcacccttcaaatgaagttgaacgtgaatatgcggtg
cgtactttcggtgaagtgaccgatgcttgtattcagcgccttcgtactggggtgacttta
gaagatggcccagcccattttgataaagttaaagctgccggtggtgaggggatgaacaag
tggtggcatgtgtcacttgctgaaggacgtaatcgtgaagttcgtcgtttgtgggaatct
caagaggttcaggtgagccgtcttatccgtattcgttacggtatgattgaattaccaaaa
tctttgccacgtggtggctgggttgaacttgaacttgagcaggtgaactatttgcgtcaa
accgccggtttagcgattgagaatcgtacactgttaggtacagataaacacagtgttgcc
cgtgcgaaagttaaaagcgctaaaattaaacgtgcggttaataagcataaagtgaatgct
gctaaaaatacccgtcagcgttaa
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