Shewanella woodyi: Swoo_3032
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Entry
Swoo_3032 CDS
T00676
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
KO
K07114
Ca-activated chloride channel homolog
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_3032
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_3032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_11
TPR_7
TPR_16
TPR_8
ANAPC3
TPR_12
TPR_6
PPR
TPR_10
Motif
Other DBs
NCBI-ProteinID:
ACA87303
UniProt:
B1KLK6
LinkDB
All DBs
Position
3714784..3716736
Genome browser
AA seq
650 aa
AA seq
DB search
MLHFLRPEWFLALLPLLIILILIWKAERVNSTWSRYISPHLANFLVSKSQQVKRSNLSYL
AASWFIAVLALSGPAISKQSLPVFEAAQGRVILMDMSLSMYATDQAPNRLTQAKFKATDL
IEALTEGETGLIAYAGDAFTISPLTRDRATLLNLLPTLSPQIMPVRGSNLPAALEQGKSL
LVQGGHIQGDIILLADGVSPSQMNAAKKVLKGTQYRLSILVFGSEQGSPIRLPDGQLLRD
NSNQVVVVKTDYSLLNELVQNADGVLVPFRSDGADLEQLTQWLNTSSDDTKATDLNGEAW
QDAGPYIALLLLLPVLLSFRHGLIASLLVMTIYQPSPVMASTWDDLWKTKNQQGMQAYQA
EDYGNASTTFTDPQWQASAHYKAGKYDEALSLFEQDSSASGLYNQGNSLMQKGEFEQAAQ
RYSKALELDPKLEGANENLELAKKLEQEKRESPEKSDNSDNGDNGDKSEQGEEGDQQDKQ
SDQSDSEQGKDQEQKQQGQNGEQDNQEQQGDQQQNSEQSDSQHNEQQSSKDNDAQMQADP
NEQQQTADDNDKNQQAQSNDEKAAAKDEESKEEQTAQAQAMQQEQNEQQGEQQQTQAAQA
VTGPEELPPEMERAMRALVDDPQVLLRNKMQLEYQKRRMQGLASKEQEQW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacttcttacgtccagagtggtttttagctctgctccctttgcttataattctg
atattaatctggaaagctgagcgagtaaactccacttggagccgctatatctctcctcat
ttagctaactttttagtctcaaaaagtcagcaagttaaacgcagcaaccttagctattta
gcagcgtcttggtttatcgccgtacttgccctttcagggcccgccatctcaaaacagtca
ctgccagtatttgaagccgcacagggacgagtgattctgatggatatgtccctctctatg
tacgctaccgatcaggcccccaacagactgacacaagccaagtttaaagccaccgatctg
attgaagcattaactgagggggaaactggacttatcgcctatgctggcgatgcgtttacc
attagcccgcttacacgggatcgagcaacactgctgaatctactgccaacactctcacca
caaataatgcctgttagaggctctaacctgcctgctgcacttgagcaaggaaaaagttta
ctggtgcaaggtggacatattcaaggcgacattattttgctcgcagatggtgtcagccca
agtcagatgaatgcagctaaaaaagtattaaagggaactcaataccgcctttcaatctta
gtatttggcagtgaacaaggctcaccaattcgtcttcctgacggtcagttgctacgtgat
aatagcaaccaagtggttgttgtcaaaaccgattactcgttgctcaatgaattagttcaa
aacgccgatggtgtacttgtcccctttcgcagcgatggcgcagatcttgagcagttaact
cagtggctaaacaccagcagtgatgacactaaagccaccgatcttaatggcgaagcttgg
caagatgctggcccctatatcgcactattattgctactgccggttctacttagcttcaga
catggattaattgcatcactacttgtaatgaccatctaccagccctcccccgtcatggct
tcgacttgggatgacctatggaagactaaaaaccaacaggggatgcaagcctatcaagct
gaagattacggcaatgcatcgacgacttttaccgatcctcaatggcaagccagtgcacac
tataaagcaggtaaatatgatgaagcgctgagcttgtttgaacaagatagcagtgcatca
gggctctataaccaaggcaatagcttaatgcagaaaggtgaatttgagcaggcggcgcag
cgttacagcaaagcactggaactcgaccccaagcttgaaggggctaatgagaaccttgaa
cttgccaaaaaattagagcaagaaaaacgagaaagccctgaaaaatctgataatagtgat
aatggtgataatggtgacaaatcagagcaaggtgaggaaggcgatcaacaagataagcaa
tccgatcagagtgactcagaacaaggtaaagatcaggagcaaaagcaacaaggtcaaaac
ggtgagcaggacaatcaagagcagcaaggcgatcaacaacaaaactcagagcagtctgac
tcacagcacaatgagcagcaatcatcgaaagataatgatgcacagatgcaagccgaccct
aacgagcagcagcaaaccgctgatgacaatgataaaaatcaacaagctcaaagcaatgat
gagaaagctgcagctaaagatgaggagagtaaagaggagcaaacggctcaagctcaagca
atgcagcaggaacaaaatgagcaacaaggtgaacaacaacaaacccaagcggcacaagcg
gtaacaggccctgaagaactaccaccagagatggagcgcgcaatgcgcgccttagtcgat
gatcctcaagttttactcagaaacaagatgcaacttgaatatcaaaagcgtcgtatgcaa
ggcctagcatctaaggagcaggaacagtggtaa
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