Shewanella woodyi: Swoo_3061
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Entry
Swoo_3061 CDS
T00676
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_3061
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Swoo_3061
Archaeal homologous recombinant proteins
Swoo_3061
SSDB
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Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ACA87332
UniProt:
B1KLN5
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All DBs
Position
complement(3751192..3752337)
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AA seq
381 aa
AA seq
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MKFIHTSDWHIGRQLHNQSLLEDQRHVLAQIVELAVTHEVDGVIIAGDIYDRSIPPANAV
ALLDEVVNRLVNELKIPVIMIAGNHDGHERLGFASRQMRESGLHIIGPLKPTLTPIVLKG
DTGDAVFYGLPYADPATVRHLFESEVSTHEQAMVELLEQVHKHDSQGLPKVVISHCFLDG
GSESESERPLSIGGADKISPSLFTPFSYTALGHLHGPQFKGEPQVRYSGSILKYSFSEQH
QKKSVTLVELTAEGEASIELLPLTAMRDVRIIEGELDTLLEAGKADLHRDDYLMVRLLDK
RAILDPMGKLREVYPNVLHLERTGLMANNSQLAIGRDQIKKGELDMFTDFFSQVSGEPMS
EAQQTVMVDTIDELHKQERTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacatccgattggcatattggccgtcaacttcacaaccaaagtttg
cttgaagatcagcgtcatgtactggcacaaattgtcgagttggcagtgactcatgaggtc
gatggagtgatcatcgccggagatatctatgaccgctcaattccgcctgccaatgcggtt
gccttgctcgatgaggtggtgaaccgtttagtcaatgagttgaagatccctgtgatcatg
atagcgggcaaccatgatggtcatgagcgtttaggttttgcttctaggcagatgagagag
agcggtttacatattatcgggccgcttaagcccacactgactccaatcgtactgaaagga
gataccggtgatgcggtgttttatggtctgccctatgccgatccggcgacggtacgtcat
ctgtttgagtctgaggtaagcacccatgagcaggcgatggttgaactacttgaacaggtc
cataagcacgatagtcaaggactacctaaagtggtgatcagccactgtttccttgatggc
ggtagtgagtctgaatctgagcgccctttgagtattggcggcgcggataaaatatcacct
tcactgtttacaccatttagttacacggcgctgggtcatcttcatggccctcaatttaaa
ggggagccgcaggttcgttactcgggctctattttaaaatactctttcagtgagcaacac
cagaagaagtcggtgaccttagttgagctgacagctgaaggggaggcgagcattgaactg
ttaccgttaacggcgatgcgtgatgtgcgcattatcgaaggtgaactcgataccttatta
gaggctggtaaagcggatcttcaccgtgatgattacctgatggttagattactcgataag
cgggcgattttagatcccatgggcaaactcagagaggtataccctaatgtgttgcatctt
gaacgtactggcttaatggccaataacagccaacttgctattggacgggatcagatcaaa
aagggagagctcgacatgtttactgacttcttctctcaagtgtctggtgaacctatgagt
gaagcgcaacaaactgtgatggttgatactatcgatgagctacataagcaggagcgcaca
tcatga
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