KEGG   Shewanella woodyi: Swoo_3085
Entry
Swoo_3085         CDS       T00676                                 
Name
(GenBank) DNA polymerase B region
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
swd  Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:swd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:swd03400]
    Swoo_3085
Enzymes [BR:swd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Swoo_3085
DNA repair and recombination proteins [BR:swd03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Swoo_3085
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2 DNApolII_insertion
Other DBs
NCBI-ProteinID: ACA87356
UniProt: B1KLQ9
LinkDB
Position
complement(3780438..3782861)
AA seq 807 aa
MSREESLPASVKGRVLSRHLVQQSGALCLHYYIKTAQGPVLVKVPNAEFLCFCATSSVDK
LLSSPGLGYVRTKALTLQNFESQSVTALYCQSRQNYRNLTRAGVDLGIPLYESDVRPEHR
YLIERFIALDVEFSGEFISTPSTDALPVFMAERARKAELDISLNAISLDFECSFDGELYS
VGLYGMSGEQPYEKVIMVGDASAITQSATPETDEKSKAAAYVEWVQDERALILALVEWFN
DYDPDIIIGWAVVTFDLALLFRRAEKLGIKLPIGRGGEQLSWKVADKFRPESLSLPGRVV
LDGIDWLKAAFYRFDSFSLESVSRTLLDEGKAIHSVEHRVDEIAQLFAHDKLALAHYNLT
DSRLVWDIFNHTELFEFAIERSKLTGLELGRVGASVAAFNNLYLPHLHRAGFVAPAMATS
QGLESPGGYVMDSIPGLYQNIIVLDFKSLYPSIIRTFLIDPKGLVQGLSLPDSDTVAGFR
GGRFSRDNPILPQLIKTLSEHRELAKKESNAPLSQAIKIIMNSLYGVLGSRGCVFHDARL
ASSITLRGHEIMKQTKVWIEECGYKVIYGDTDSTFVWLGNDPLEVDADTAAKGLVEMVNT
HWRERLLSSMNIECFLELEYESHYEQFFMPTLRGSTEGSKKRYVGAYTQQSGELKLVFKG
MEQVRSDWSPIARRVQESLYYRLFSKQDVKLFLQSIVEELLSGKLDSELIFSKKLRRDIS
DYKAKSSPHVKAAQIQYELSGNTSLSKRGAQIDYLMTVNGAEPVEYRKSNIDYQYYIERQ
LGPIADPILTILGESFSSMNSNQLTLI
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgagtagagaagagtccctcccagcgagtgttaaaggcagagtgctatcacggcatctg
gtgcaacaatcgggcgctctttgtctgcattattatattaaaacagcacaggggcctgtg
ttagtgaaggtgccgaatgctgagtttctctgtttctgtgcaacctctagcgttgataag
ttgctctcttcgccaggcttaggttatgtgagaaccaaggcgctgactcttcagaacttt
gaatcccagagtgtgacagcactttattgtcaatcacggcaaaactatcggaatttgacc
cgagctggtgttgatcttgggatcccactttatgaatctgatgttcgtcctgaacatcga
tacctcattgaacggtttattgcgctggatgttgagttctccggtgagtttatatcaacc
ccgtcaactgatgctttacctgtttttatggctgagcgtgctcgtaaagctgagctggat
atctcacttaatgctatctcattggattttgagtgtagtttcgacggagagctttactca
gtgggcttatatgggatgagcggcgagcagccctatgagaaagtcattatggtcggggat
gcaagcgctataacacagagtgcaacgcctgagacagatgagaaaagtaaggcggcagct
tatgtcgagtgggtacaagatgaacgagcactcattctcgccttggtcgagtggtttaat
gattatgatcccgacattattatcggttgggccgtggttacctttgaccttgctctgctg
tttcgccgagctgaaaagctagggataaaattgcccattggccgaggaggggaacagctt
agctggaaagttgccgataaattcaggcctgaatccctttcattgcctgggcgagtcgta
ttagatggtatcgattggcttaaagctgcattttatcgttttgatagtttctccttggaa
tctgtatctcgtaccttgctcgatgagggcaaggctatccatagtgttgagcaccgtgtc
gatgagatagctcagttatttgcgcatgataagttagcgcttgcacactataacttgacc
gatagcagactcgtgtgggacatctttaatcatactgagttgtttgagtttgctattgag
cgctcaaagctaacaggtttagagctcgggagagtaggggcctcggtcgctgcttttaat
aatttgtatctaccgcatctgcatcgtgcaggttttgtagcgccagccatggcgactagc
caagggttagagagtccaggtggttatgtgatggactctattcctggcttataccaaaat
attattgtgttggattttaaaagtctgtatccctcaattattcgtacctttcttattgat
cctaaggggttagtgcaaggcttgtctctgccagactctgataccgttgcaggttttcgt
ggtggaaggtttagtcgagataaccccatacttcctcaactcattaaaaccttatctgag
cacagagagttggcgaaaaaggagagtaatgcaccgctgtctcaggccattaagatcatc
atgaactcgctttatggggtattaggttcaagaggttgtgtatttcatgatgctaggtta
gcaagctccattacattaaggggccatgagatcatgaagcaaactaaggtttggattgag
gagtgcggatataaggttatctatggtgatactgactctacctttgtttggttgggtaat
gacccacttgaggtcgatgctgataccgccgctaaaggcttagtggagatggtgaacact
cactggcgtgaaaggttattaagctcaatgaatattgagtgtttcttggagcttgaatat
gagtcccattatgaacagttttttatgcccacattaagaggttctactgaggggtctaag
aagcgttatgttggcgcttatactcagcaaagtggcgagttgaaattagtatttaaaggg
atggagcaagtgcgaagtgattggagtccaattgcaaggcgagttcaagagtcactgtat
tatcgtcttttctccaaacaggatgtgaagttgtttttgcagagtatcgtagaggagtta
ttgtcaggaaagcttgattcagagcttattttttctaagaagcttcgcagagatattagt
gattacaaggccaaatcttcaccacatgttaaagctgcgcagatccaatatgagttatct
ggtaatacgagcctctctaaaagaggggcgcaaattgattatttaatgacagtaaatggc
gctgaacctgtggaatacagaaaatccaatatcgactatcaatactatatcgagcggcaa
ttggggccgatagctgatcccattcttaccattttgggcgaaagtttctctagcatgaac
tcaaatcagcttacgttaatatag

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