Shewanella woodyi: Swoo_3095
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Entry
Swoo_3095 CDS
T00676
Name
(GenBank) Methionine gamma-lyase
KO
K01761
methionine-gamma-lyase [EC:
4.4.1.11
]
Organism
swd
Shewanella woodyi
Pathway
swd00270
Cysteine and methionine metabolism
swd00450
Selenocompound metabolism
swd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Swoo_3095
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Swoo_3095
Enzymes [BR:
swd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.11 methionine gamma-lyase
Swoo_3095
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Met_gamma_lyase
SelA
GDC-P
Motif
Other DBs
NCBI-ProteinID:
ACA87366
UniProt:
B1KLR9
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Position
complement(3793254..3794432)
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AA seq
392 aa
AA seq
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MQDKWKLATKVIHAGHIRSSSGALVTPLCQSATFVFDSAEQGGERFAGDQPGYIYTRLGN
PTTAELERKMAALEGAEAAVATASGMAAVSSALLANLQHGDHLVASKAVYGCTFSLMTAQ
FLRFGIEVTLVDFNDLSAIKEAIKPTTKVLFCETPVNPHLDVFDLDAIAKIAQANKLVSI
VDNTFMTPLLQQPLTHGIDIVVHSATKYLNGHGDVIAGVICGSNEQIEQIKYETVKDLGG
VLSPHDAWLILRGLKTLDVRLARHCDNAECLAYYLLNHEKVTKVYYPGLEGHSGYPLLGT
QMKRAGGVIAFELNGAMEQSLQFINSLTLFSIAVSLGDAESLIQHPASMTHSPYSEQERE
LAGIGESLLRISVGLESVEDLISDLEQALALV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaaatggaaattagccacaaaagtgatccatgcaggacatattagaagtagt
tctggcgcactggtaacccctttatgccaaagtgcgacttttgtttttgatagtgctgaa
cagggaggtgagagatttgccggcgatcaacccggttatatctacacccgcttaggtaat
ccaaccacagcggaactagaacgtaagatggctgcacttgaaggtgctgaggccgctgtt
gcgacagcgtcgggcatggctgctgtgtcatctgcgctgttggccaatctgcagcatggc
gatcatcttgtggcatctaaggctgtatatggttgcactttctccctgatgacagcacaa
tttttacgatttggcatcgaggttaccttagtcgattttaatgacctatcagccattaaa
gaagcgattaaacccacaaccaaagtgctgttttgtgaaaccccggtaaatcctcattta
gacgtattcgacttagatgctatcgcaaagattgctcaagcaaacaagttagtgagtatt
gtcgataacacctttatgacccccctgttacagcaacccttgacccatgggatcgatatc
gttgttcatagtgcgaccaagtaccttaatggtcatggtgatgtgattgctggggtgata
tgcggtagcaatgagcagatagagcagattaaatatgaaaccgtgaaggacttgggcggt
gtgttatctccccatgatgcttggctgatactgcgtggtcttaagacgctagatgtaaga
ctagccagacattgtgataatgctgaatgcttggcgtattacctgctaaaccatgaaaaa
gtgactaaagtgtattacccaggtcttgaggggcatagtggttacccactgcttggtact
cagatgaaaagagccggtggggtgattgccttcgagctaaatggcgcaatggagcagtcc
ctgcagtttattaacagcttaacgctattttctattgccgttagtttaggcgatgccgag
tctcttattcaacatccagcttcgatgactcactccccttactccgaacaggagagggag
cttgctggtattggcgagagcttattgcgaatatctgtgggactggagtctgtagaagat
ttgataagtgacttagagcaggctttggccttggtttag
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