Shewanella woodyi: Swoo_3110
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Entry
Swoo_3110 CDS
T00676
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swd03032
]
Swoo_3110
03036 Chromosome and associated proteins [BR:
swd03036
]
Swoo_3110
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_3110
DNA replication proteins [BR:
swd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Swoo_3110
Chromosome and associated proteins [BR:
swd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Swoo_3110
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Swoo_3110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
ACA87381
UniProt:
B1KLT4
LinkDB
All DBs
Position
complement(3809551..3809823)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIEAVTDGLKDGDKISLVGFGTFEVRQRAERTG
RNPQTGAEIKIAAANIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcttctggtgctgacatttctaaagccgct
gctggccgtgcattagattctttcattgaagcagttactgacggcttaaaagatggcgat
aagatttctcttgttggttttggtactttcgaagtgcgtcaacgcgcagagcgtactggt
cgcaacccacaaacgggtgctgagatcaagatcgctgcagctaacattcctgcattcaaa
gcaggtaaagctctgaaagacgctgtaaactaa
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integrated database retrieval system
