Shewanella woodyi: Swoo_3116
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Entry
Swoo_3116 CDS
T00676
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
swd
Shewanella woodyi
Pathway
swd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Swoo_3116
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swd01007
]
Swoo_3116
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_3116
Enzymes [BR:
swd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
Swoo_3116
Amino acid related enzymes [BR:
swd01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Swoo_3116
Transfer RNA biogenesis [BR:
swd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Swoo_3116
Prokaryotic type
Swoo_3116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ACA87387
UniProt:
B1KLU0
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All DBs
Position
complement(3818053..3819432)
Genome browser
AA seq
459 aa
AA seq
DB search
MLKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYD
VNFLRNITDVDDKIIKRAAENKESCDSLTERLIGEMHKDFDSLNMKRPDFEPRATLHMAE
IIEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRDPMD
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIA
QSCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAATIRYFLLSGHYRS
QLNYSEDNLKQAKSALARLYTALKDLDLTVEPAAAENFVSKFKQAMDDDFNTPEAYSVLF
DMVREVNRLKVTDLAQASALAVRLKELAGVLGILEQDVDSFFKGESNDAEVAEVEALIAE
RNRARAEKDWPAADIARDGLNALGVILEDGPEGTTWRKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagctatacaacagcctgacccgccaaaaagaggaatttaaaccattacagcca
ggtaaagttggcatgtatgtgtgtgggatcaccatctatgatttatgtcatattggtcac
gggcgtacctttgtagctttcgacatgatagtaaggtacctacgctattctggttacgat
gtgaattttctgcgtaacattactgatgttgatgacaagatcatcaagcgtgcggcagaa
aacaaggagagctgtgattcactgacagagcgtttgatcggtgaaatgcataaagatttc
gactcgttaaacatgaagcgtcccgattttgagcctagagcaacgttgcacatggctgag
attatcgagatggttgaaaagcttattgagaaagagcacgcctatgtgtcatccaatggt
gatgtgttgtttagtgtctcttcattccctgagtatggtcgtttgtctggacaaaattta
gagcaactacaggccggagctcgtgtcgaagtcgaagactccaagcgcgatcctatggat
ttcgtactgtggaagatgtcaaaaccaggtgagccgacttgggagtctccatggggacct
ggtcgtccaggttggcatatcgagtgttcagccatgaacagcaagcatcttggccaacat
tttgatattcatggtggtggtagcgatcttcagttccctcatcatgaaaatgagatcgca
caatcttgctgcgcccataatacgccttatgtgaactactggatgcacacaggcatggtg
atggtcgataaagagaagatgtctaagtctcttaataacttcttcactatccgagatgta
ttagctcattatgatgcggcgacaattcgttacttcttgttgtctggtcactaccgtagc
caacttaactactcagaagataaccttaagcaagctaaatctgcattagcacgtctgtac
acggcactaaaagatctggatttaactgttgagcctgcggcggctgaaaactttgtgtct
aagtttaaacaggcgatggatgatgactttaatacgcctgaagcatattcagtattgttt
gatatggtgcgtgaggttaaccgtcttaaagtcactgatttagctcaagcttcggctctc
gcagtgcgtctaaaagagttggctggtgtacttggtatactcgagcaagatgtcgatagc
ttctttaaaggcgagagtaacgatgctgaagtcgctgaggttgaagcattaatcgcagag
cgtaatcgagcacgagctgagaaagattggcctgctgcggatatcgcccgtgatggactt
aacgccttaggtgtgattttggaagatggccctgaagggacaacgtggcgtaagaagtaa
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