Shewanella woodyi: Swoo_3237
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Entry
Swoo_3237 CDS
T00676
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swd03036
]
Swoo_3237
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_3237
Chromosome and associated proteins [BR:
swd03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Swoo_3237
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Swoo_3237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
YkyA
Syntaxin
GCIP_C
DUF1028
Motif
Other DBs
NCBI-ProteinID:
ACA87507
UniProt:
B1KNP9
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All DBs
Position
3965722..3966117
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AA seq
131 aa
AA seq
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MSDFLEILTHGRRFKAAVKELSIDDLNELAGKLEKIISERVSQAEAETAAMAERNAKIDE
IRKQMEAVGLSVDDLGATAVKSAPKKRAPRPAKYTIVDVNGETITWTGQGRMPTVFKNEL
DKGRSMDDFLI
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttcttgaaatactaactcacggccgtcgttttaaagcggcagtaaaagaa
ttatctattgatgatttaaatgaattagctggtaagcttgaaaagattatctctgaaaga
gtttctcaagctgaagctgaaacagcagcgatggctgagcgtaatgctaaaattgatgag
atccgtaagcagatggaagcagttggcttatctgttgatgatctaggtgctacagcagta
aaatctgcacctaaaaagcgtgctccacgcccggctaaatacactattgttgatgtgaat
ggtgaaaccatcacatggactggccagggacgtatgccgacagtatttaaaaatgagtta
gataaaggtcgcagcatggacgacttcctaatctaa
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