Shewanella woodyi: Swoo_3335
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Entry
Swoo_3335 CDS
T00676
Name
(GenBank) sodium ion-translocating decarboxylase, beta subunit
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
swd
Shewanella woodyi
Pathway
swd00362
Benzoate degradation
swd00620
Pyruvate metabolism
swd00650
Butanoate metabolism
swd01100
Metabolic pathways
swd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Swoo_3335
00650 Butanoate metabolism
Swoo_3335
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Swoo_3335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_3335
Enzymes [BR:
swd01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Swoo_3335
Transporters [BR:
swd02000
]
Other transporters
Primary active transporters [TC:
3
]
Swoo_3335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
ACA87604
UniProt:
B1KPS1
LinkDB
All DBs
Position
complement(4083860..4084990)
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AA seq
376 aa
AA seq
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MDGLIAFWSESGIANFTGGQLFMMGVGALLLYLAIVKRFEPLLLLPIGFGAILANIPNGG
FTDEGGLLYFAYHVGIETGIFPLLIFMGVGALTDFGALIANPKMLLLGAAAQFGIFATLI
GAVALNFVPGFDFSMKDAGAIAIIGGADGPTAIFLASKLAPDLLGAIAVAAYSYMALVPL
IQPPIMKLFTTEAERQIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSADKFLQIETLGILLLGAVAFAIGTA
TGVLMAKLMSKLSGGKINPLIGAAGVSAVPMAARVVNKVGLESNQHNFLLMHAMGPNVAG
VLGSAVAAGVLIAVLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggacgggttaattgcattttggtctgagtccggtattgctaattttaccggtggtcag
ttatttatgatgggtgtcggtgcactactgctttacctagcaatagtaaaacgttttgag
ccactgctgcttttgcctatcggttttggtgctattttagcaaatatcccgaacggtggt
tttaccgatgaggggggcttactctactttgcctatcatgtggggatcgaaacgggcata
tttcctctgttgatctttatgggggttggtgcacttaccgactttggagctctgatagct
aaccctaaaatgttacttttaggggcggctgctcaatttggtatctttgcaactttaatc
ggtgctgtggcgctaaattttgtgccgggttttgattttagtatgaaagatgcaggtgcc
attgccatcatcggtggcgcggatgggcctacagctatcttccttgcttccaaacttgcc
ccagatctgctgggagctattgcagtggctgcgtactcttatatggcgctagttcctctt
attcagcctccaattatgaaactctttaccactgaggctgaacgtcagataaagatggag
cagttaagggaggtgagtaagaaggagaagattattttcccgcttatggtacttggctta
acaattctgtttctgccagcagcgacgcctttagtggggatgttctgtcttggtaatctg
atgcgtgaatccggtgttgtggatagattatccaatacggctcaaaatgagttgatcaat
atcgttaccatcttcctaggtttagcggtgggctcaaagttgtcggcggataagtttttg
caaattgagaccttaggaattttgcttcttggggcggttgccttcgctattggtaccgcg
accggtgtactgatggcgaagctgatgtctaagctgtcaggaggtaagatcaacccacta
ataggagctgctggtgtctctgctgtgcctatggccgcaagagtcgtgaataaggttggg
ctagagtctaaccaacataacttcttgttaatgcatgctatgggacccaatgtggcgggc
gtacttgggtcggccgtcgccgctggtgtgttgattgctgtactaggttag
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