Shewanella woodyi: Swoo_3359
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Entry
Swoo_3359 CDS
T00676
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_3359
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Swoo_3359
TLS (translesion DNA synthesis) factors
Other SOS response factors
Swoo_3359
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_22
LRR_NXF1-5
RPW8
Motif
Other DBs
NCBI-ProteinID:
ACA87628
UniProt:
B1KPU5
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All DBs
Position
4116844..4118505
Genome browser
AA seq
553 aa
AA seq
DB search
MLCQLSINNFAIVRFLELDFKPGMTSITGETGAGKSIAIDALGLCLGNRADASTVRPGAS
KAEVSARFSLGDVPLAKRWLEDNDLELDQECILRRTINSDGRSRAYINGNPVPLIQLKSL
GQLLIGIHGQHAHHAMLKSEHQLTLLDSYANHRLLLEAVSAGYQRCKLIEKELKALQQTQ
HERIARKQLLQYQVEELNEFALNEGEFEEIEAEHKKLANGTALIQACKSELYILQENEQG
SVESQINAGITQAQELESYDPALKSIVNMLNDALIQIQESSSEIERYLDKLELDPEYFEQ
LEQRLSKLMQLSRKHQVLPCALYEHHQELLTELSSLDSDEDALTQLEEQVNASRESYLAH
AKKLSQSRSRYAKELDKKVTQSIHELSMPKGKFCISVTFNEEQISPNGCDSIEFQVSTNP
GQPMQAISKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
GDSTQVFCVTHLPQVAGNGHQHMFVNKHSKAGKTETSMVSLDKLQRIEELARLLGGDVIT
SNTLANAKELLQG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctttgccaactcagcattaataattttgccattgttcgatttctcgaattggatttt
aaacctggaatgaccagcattacaggtgaaacaggtgcaggtaaatctattgcaattgac
gccttggggctctgtcttggcaatcgtgccgatgccagtaccgttcgccccggagcatcg
aaagctgaagtcagtgcaagattttcattaggtgatgtccccttagcaaagcgttggctt
gaagataatgaccttgaactagatcaggagtgtattttaaggcgaaccatcaacagtgat
ggacgctcaagagcttacataaacggcaacccagtcccactcattcagcttaaaagccta
ggacagctactaattggcatccatggtcagcatgctcatcacgctatgttgaagagtgag
caccagctaactctattagacagttatgctaaccacagactgctactcgaagccgtttct
gcaggttatcagcgttgcaaattaatagagaaagagcttaaggcactacagcaaactcaa
catgaacgtatcgcacgtaagcagttactccaatatcaagttgaagagctcaatgagttt
gccctcaatgagggagagtttgaggagattgaagctgagcacaagaaacttgccaatggt
acggcccttattcaggcctgcaaaagtgaactctatattctacaagagaatgaacagggc
agtgttgaatcacagataaatgctggtatcactcaagctcaagagctcgaaagttacgat
cctgctctaaaaagcatagttaatatgcttaatgatgcgcttatccaaattcaggaaagc
agcagtgaaatagagcgttatttagataaattagagctagatcctgagtattttgagcag
cttgaacagagactatctaaattaatgcagctttcacgcaaacatcaggtacttccttgc
gccctctatgagcatcatcaggagctactaactgagcttagctcactagattcagacgaa
gacgcactcactcagctggaggagcaagtcaatgccagcagagagagctaccttgctcac
gctaaaaagctaagccaaagccgtagtcgatatgccaaagagttagataaaaaggtcact
caatcgatacatgaactcagcatgccaaagggcaaattctgtatctcagtcaccttcaat
gaagagcagatctcacctaacggctgtgacagcatagagtttcaggtctcgaccaatcct
ggccaaccaatgcaagccatctctaaggttgcatcaggtggtgagctctcacgtatcgga
cttggcattcaagtgatcaccgcgaaaaaagtatcgacaccgacactgatttttgacgaa
gtggatgtggggatttcgggtccaactgccgcagttgtagggcgtatgcttcgctctctt
ggagactcgactcaagtattttgtgtgacccacctgcctcaggttgcgggtaacggtcac
caacatatgttcgtcaacaagcacagtaaagcaggtaaaacggaaacctctatggtctct
ttagataagctgcaacgtattgaggagttagcaagattacttggcggcgatgtcatcacc
agcaatacactagccaacgccaaagagctacttcagggctaa
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