KEGG   Shewanella woodyi: Swoo_3366
Entry
Swoo_3366         CDS       T00676                                 
Name
(GenBank) spermidine/putrescine-binding periplasmic protein-like protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
swd  Shewanella woodyi
Pathway
swd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swoo_3366
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:swd02000]
    Swoo_3366
Transporters [BR:swd02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    Swoo_3366
SSDB
Motif
Pfam: SBP_bac_6 ParB Gp44-like_2nd
Other DBs
NCBI-ProteinID: ACA87635
UniProt: B1KPV2
LinkDB
Position
4124456..4125541
AA seq 361 aa
MRYIILLASTLAMVSPISHATEILRIFTWDGYVTPQDLTAINQQLKVHDYNIEAQVISPL
ASGPEQMFDVIRSGKCDISFLTLNYIKMQEEKTAKLLQVINTQSPRMPNYKKLKAELTAL
PMGVVKQGSVYIPFGGGAYGIWANMNKLTIDELPVSVKDLWDDKWTGKLSLAKGQIQPNI
ALVMLSMDKPPFYINDLINSGHRRQAMQFVADEAQLQTNLLYQQVHSFWDGTPSYDQELL
LTSSYGVEIENKNAEGGQWQYVQFEEGSTVWLDTINFAKHLSGAKLEAAEIVANYFIGKS
VQNRLVNELGMVSVSNLVENNPLLDNNPDFFSKQMFWQPYDKTADNIMDLMSDAAMTQAI
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcgttatattattctgttagctagcactttagctatggtctctccaatctcacatgca
acagagatcctacgaatatttacctgggacggttacgtcaccccccaagatctcaccgca
attaatcagcaactcaaagttcacgactacaatattgaagctcaagtcattagcccgctt
gcgtctggccctgagcagatgtttgatgttatccgctccggcaaatgtgatatctcattt
ctgacccttaattacatcaagatgcaggaggagaaaaccgccaagcttcttcaggttatc
aacactcagtctcccagaatgcctaactacaagaagctaaaagctgagctaacagcactt
cctatgggagttgttaagcagggaagtgtctatatcccctttggaggtggagcctatggc
atatgggctaacatgaataagttaacgattgatgagttgccagtatccgtaaaagatctc
tgggatgataagtggacaggtaaactctctctggccaaagggcagatccagccaaatatt
gctctagtcatgctctctatggacaagccccctttctatattaacgacctcatcaactca
ggtcatagacgacaagcgatgcagtttgttgcagatgaagcacagctccagactaacctt
ttatatcaacaggtccactccttttgggatgggactcctagctatgatcaggagctacta
ttaacctcaagctatggtgttgagattgagaataaaaatgctgagggtggtcaatggcaa
tatgttcagtttgaagagggtagtactgtttggctcgataccatcaactttgctaaacac
ttaagtggagcaaaactcgaagcagccgaaatcgtcgctaactactttatcggaaaatcc
gttcagaatcggctcgtcaatgagttaggcatggtatcggttagcaatcttgtcgaaaac
aatccattactcgataacaatccagactttttttccaaacagatgttctggcaaccttat
gacaaaaccgccgacaacatcatggacctcatgtcagatgctgcgatgacacaagctatt
ccatag

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