Shewanella woodyi: Swoo_3416
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Entry
Swoo_3416 CDS
T00676
Name
(GenBank) alpha amylase catalytic region
KO
K00701
cyclomaltodextrin glucanotransferase [EC:
2.4.1.19
]
Organism
swd
Shewanella woodyi
Pathway
swd00500
Starch and sucrose metabolism
swd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Swoo_3416
Enzymes [BR:
swd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.19 cyclomaltodextrin glucanotransferase
Swoo_3416
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_20
TIG
Alpha-amylase_C
Cyc-maltodext_C
Malt_amylase_C
DUF4136
DUF4469
Motif
Other DBs
NCBI-ProteinID:
ACA87684
UniProt:
B1KQS8
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All DBs
Position
4178930..4181041
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AA seq
703 aa
AA seq
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MTRLNSALRKPHLLPLLATLIATPSLASDTDVSNTVNYSTDVIYQIVTDRFLDGDSGNNP
PPAMLDSSCSNLKKYCGGDWQGIIDKLNDGYFSDMGITALWISQPVENIHGVLNDAQGST
SYHAYWARDFKRTNPYFGTFNRFDTLIQTAHNLGIKIIIDFAPNHSSPASSDDSSYAENG
RLYNDGVLMGGYSNDSANLFHHNGGTDFSTIEDGIYRNLFDLADFNHENQQMGQYLQEAI
ALWLDKGVDGIRVDAVKHMPLGWQKKWMSAIYKHKPVFSFGEWFLGSNEVDPANHDFANN
SGMSLLDFQFAQTTRKVFRDQTADMRALDQMIQATSSSYQEVIDQVTFIDNHDMDRFQQT
GVNQRRIEQALAFTLTSRGVPGIYYGTEQYLTGNGDPDNRAMMPNFNQTTTAYNVIKALA
PLRKSNPALAYGDTQERWSNSDVYVYERQFGSSVVLVAINRSSSQSYNLTGLFAALPQGN
YPDILSGKLNGNSIDVSANGAVTPFNLSSGEVGVWQYTASETQPKLGHVGPMMAAPGDTL
TLDGRGFGNTGAVQVGATNAQVLSWSDTQVKIQIPTISAGTYSVKLTTSNGQSSYPDLDV
LTGPQKSVRFILENGYTQWGEAIYLVGNTPELGSWDPNKAIGPFYNQVVEQYPNWYQDVS
VPTNTQLQFKFIKKNGNQVIWESGSNHQLSAGSTDSSIRVNWQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcttaaactctgccttacgaaagcctcatctactgccgctgcttgccaccctg
attgccactccaagcttagctagcgacacggatgtgagtaatacggtgaactattcaacc
gatgtgatatatcagatagtcaccgaccgttttctagacggggatagcggtaataacccg
ccaccagccatgttagatagcagttgtagcaacctaaaaaaatattgtggtggtgattgg
caggggatcatagataaactcaacgatgggtattttagcgatatggggatcaccgcattg
tggatctctcagcccgtcgaaaatattcacggtgtgctcaatgacgcccaaggaagcacc
tcctatcatgcttactgggccagagactttaagcgaaccaacccctactttggtactttc
aacaggttcgataccttaatccaaaccgcacataacttagggattaagatcattatcgat
tttgcccccaaccacagctcacccgcttccagtgatgacagcagttatgctgaaaatggc
cgactctataatgatggcgtcttgatgggcggctatagtaatgattctgccaacttgttt
caccacaacggcggtaccgatttttcaaccattgaagatggcatctatcgcaatctcttc
gacttagccgactttaatcatgaaaaccaacagatgggtcagtatctacaggaggctatt
gccctgtggttagataagggcgtcgatgggatccgcgtggatgcagtcaagcatatgccc
ttaggctggcagaagaagtggatgagcgccatctacaaacataaacccgtatttagtttc
ggggagtggtttttgggcagcaatgaggttgatcccgctaaccatgattttgccaacaat
agcggcatgagtctgctggactttcagtttgcacaaaccacccgtaaagtgttccgcgat
caaactgccgatatgcgtgcactggatcagatgatacaggcaacatcctcaagctatcag
gaggtaatcgatcaagtcacctttatcgacaatcacgatatggacaggttccagcaaaca
ggcgtcaatcaacgccgcatcgagcaggcccttgccttcacgctaacttcacgtggcgtt
ccagggatctactacggcaccgagcaatacctaactggcaacggcgatcctgataatcgc
gcaatgatgccaaactttaatcaaaccaccacagcctacaatgtgataaaagccctagcg
cctctgcgcaagtctaatccagcactggcttatggcgatactcaggagcgctggtcaaac
tcagatgtctatgtttatgaacgtcaatttggcagtagtgtggttctggttgccatcaat
cgcagcagtagccaatcctataatttaacaggcctcttcgccgcattgcctcaaggaaac
tacccagatatcctctcaggtaaactcaatggtaacagtatcgacgtctcagccaatggc
gccgtcactccattcaacttaagcagtggagaggtcggagtttggcagtataccgccagt
gaaactcaaccaaaacttggccatgtaggcccaatgatggcagcgcctggagataccctc
accttagatggacgaggatttggcaacacaggagcggttcaagttggagccacaaatgca
caggttcttagctggtccgacacacaagtaaaaatccagatcccgactatctctgcaggc
acttactcagtcaagctcaccacatcaaacggacagagcagctatccagatctagatgta
cttactggaccgcaaaagtcggtacgttttattctggaaaatggttacacccaatggggg
gaagcaatctaccttgtaggtaataccccagagcttggtagctgggatcccaacaaagct
atcggccccttctataaccaagttgttgagcagtacccgaactggtatcaagatgtcagc
gttccgacaaacacccaactgcaatttaagtttattaagaaaaatggcaatcaggtgatt
tgggagagcggcagtaaccatcagctcagcgcagggtctaccgactctagtatcagggtt
aattggcagtag
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