Shewanella woodyi: Swoo_3442
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Entry
Swoo_3442 CDS
T00676
Name
(GenBank) Fmu (Sun) domain protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_3442
Enzymes [BR:
swd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Swoo_3442
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Swoo_3442
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_25
Ubie_methyltran
Methyltransf_31
EST1_DNA_bind
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ACA87710
UniProt:
B1KQV4
LinkDB
All DBs
Position
4207629..4209011
Genome browser
AA seq
460 aa
AA seq
DB search
MVDALNTSQTRSTEPSADALSFDNLQADTPAQKRALSYANTIYQLFHQVMDKQQPADRVV
GEYFRVNKKHGSKDRRVIRESLFALFRWWGWLRKFDSQSEIEQTWLIQLTINARLESHPW
SEFISAWETFAGLVSINSAPEFSHISQRATWLNEQFSEHCFTTDELVPDWFWEVCPSENS
EQRLALVESLSSRPPIWGRVQNIDLDDAIQSLQKLDIPAKGCEFFSDSINLGNKNINLNG
LSLYKEGELEIQDLGSQVVGQLCQPRADDNWWDTCSGAGGKSLQIRSLMLQQSQEAQGSI
IASDIRRKPLEELAKRAKRAGFKKITTSPWKSDELPVPHAHFDGVLVDAPCSCTGTWRRN
PDMRWIDTIDTVLDKPSLQLDILTRSSKAVKAGATLVYATCSLSPLENEEVVKAFLAQHS
DFSLEITTHPFTGAKDTMHTVVPYQADTDGMFVARMLKRS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgccttgaatacaagccaaactcgctcaacagagccatcagctgacgcactc
tcttttgataacctgcaagccgatacgccggctcaaaaacgtgcattaagctatgccaat
accatctatcagctgtttcatcaggtgatggataagcagcagcctgccgatcgggttgta
ggtgaatatttcagggtaaataagaaacacggctctaaagacagacgagttatccgagaa
agcctgtttgcactgtttcgttggtgggggtggttacgaaagttcgactctcaatcagaa
attgagcagacttggcttatacaattaaccattaatgcccgtttagaatctcacccgtgg
agtgaatttatctcagcgtgggagacgtttgcaggtttagttagcataaattcagcccct
gagtttagccatatatcacaaagagccacttggttaaatgagcagttctctgaacattgt
ttcacgaccgacgagctcgttcccgattggttttgggaggtctgcccaagtgagaatagt
gagcagcgtttagcattagttgagtcgctctcatctcgtccacctatctggggacgggta
cagaatatcgaccttgatgacgccattcaatctctgcaaaaattagatattccagctaaa
ggttgtgagtttttcagcgacagcatcaaccttggtaataagaatattaaccttaatggg
ctctctctttataaagagggtgaacttgagatccaagatcttggctctcaagttgttggc
caactctgtcaacctagagctgatgacaactggtgggatacgtgtagtggcgcaggtggt
aaaagcttacaaatacgctcgctaatgttacaacaatctcaagaggctcaaggcagtatt
atcgcttctgatatacgtagaaagcccctagaggagctggcgaaaagagcaaaacgtgct
ggctttaagaagatcaccacatccccttggaaatcagatgaactcccagtacctcatgct
cactttgatggggtgttagtcgatgctccctgcagttgcactggcacttggcgacgtaac
ccagatatgcgctggatagacaccatagacacagtgctagataagccgagtttacagctg
gatattttaactcgatccagcaaagccgtgaaagcaggtgcaactttggtctacgctaca
tgctcactctctcctttggagaatgaagaggtggtcaaggcctttctggctcaacacagt
gattttagcctagagataaccactcacccctttactggcgctaaagacaccatgcatacc
gtagtcccttatcaggcagatactgatggtatgtttgtcgcacggatgctcaaacgtagc
taa
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