Shewanella woodyi: Swoo_3720
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Entry
Swoo_3720 CDS
T00676
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
swd03110
]
Swoo_3720
Chaperones and folding catalysts [BR:
swd03110
]
Heat shock proteins
HSP100
Swoo_3720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_24
AAA_14
AAA_18
TniB
nSTAND3
ATPase_2
bpMoxR
IstB_IS21
AAA_7
NBD_SMAX1
DUF815
NACHT
AAA_25
AAA_19
ATP_bind_1
AAA_6
MCRS_N
Motif
Other DBs
NCBI-ProteinID:
ACA87980
UniProt:
B1KDX8
LinkDB
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Position
complement(4531589..4534162)
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AA seq
857 aa
AA seq
DB search
MRLDRMTNKFQTAISDAQSLALGRDHQFIEPIHLMMALLNQDNGSIHPLLTQAGINVSSL
RSLVSQELERLPKVEGTGGDIQLSQSLIRLLNLCDKLSQKRKDKYISSELFILAALEGND
TLAQSLKKSGATKELMEETIKQVRAGKNIDDPNAEDQRQALKKFTVDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSL
DMGSLVAGAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPSVEDTVAILRGLKERYELH
HHVEITDPAIVAAASMSNRYVSDRKLPDKAIDLIDEAASSIRIQIDSKPEPLDKLERRAI
QLKLEEQALTKEADEASLRRLLTIRKELREVEVKASELNEVWRTEKAALAGTQHIKSDLE
QARLDLDVARRASDLTRMSELQYGRIPELEKQLDLASQAEMQEMTLLRNKVTDVEIAEVL
SRATGIPVSKMLEGEREKLLHMEDALHTQVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGS
FLFLGPTGVGKTELCKSLAKFLFDTESALVRIDMSEFMEKHSVARLLGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDIIQERFSTLSYDEMKSEVMNVVVHSFRPEFLNRVDETVVFHPLGEKHIEHIASIQIE
SLMRRLAEKDYELDISDDALSFIARAGFDPVYGARPLKRALQQEVENPLAQKILSGSLVP
GKPIIVENEEGELSFKQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatcgtatgaccaataaatttcaaacggcaatttccgatgcgcaatctctc
gcgctaggtcgtgatcatcagtttattgaacccattcatcttatgatggccttactgaat
caagataatgggtctattcacccgttattaactcaggctggcattaatgttagttcgttg
aggtctttggttagccaagagttggagcgtttaccaaaggtggagggaaccggaggagat
attcagctatcacaatctctgatccgtctgttgaacctatgtgacaaactctctcagaaa
cgcaaagataaatatatctccagtgagttatttatactcgcagcacttgaaggaaacgat
acgcttgctcaaagcttgaaaaaatctggcgcgacgaaagagttgatggaagaaacgata
aaacaggtacgcgccggaaagaatatcgacgatcctaatgcggaagatcaaaggcaagca
cttaaaaagtttaccgtcgatctgactgagcgtgcggagcaggggaaacttgaccctgtt
attgggcgtgatgatgagatccgccgtacaattcaagtgttacagcgaagaagtaaaaac
aaccctgtattgattggtgaaccaggtgtgggtaaaaccgccattgttgaggggttagct
cagcggatcattaatggtgaagtacccgaagggataaaaaacaagcgtgtgttgtcatta
gacatgggctcgttagttgctggggctaaatatcgtggtgaatttgaggaaagattaaag
gcggttctcaatgagttgtctcaagaggaggggcaagtgatcctctttatcgatgagctg
catactatggttggcgcaggtaaaggggatggtgctatggatgcgggcaatatgcttaaa
cctgcattagcacgtggtgaccttcactgtgtgggtgcaacgaccttagatgagtatcgt
caatatattgaaaaagatgcggcacttgaaagacgctttcaaaaagtcttggttgaagag
ccgagtgttgaggatactgttgctattctacgtggtctaaaagagcgttatgagcttcat
catcatgttgagatcactgatcctgcgattgttgctgccgctagcatgtcaaatcgttat
gtttctgataggaaactaccggataaagcaatagatcttatcgatgaagctgcatcgagt
atccgaatccagattgactctaaacctgagccgctggacaaattggagcgccgtgccatt
cagcttaagctagaggagcaagcactgacaaaagaagctgatgaagctagccttcgccgc
ctgctgactatacgaaaagagctaagagaagttgaagtgaaggcctctgagctaaatgag
gtgtggcgaacagagaaggctgcactagctggaacccaacatataaagtcggatctggag
caggcaagattggatctcgatgttgctcgcagagctagtgatctgactcgtatgtctgaa
ctgcagtacggtcgtattcctgaactagagaaacagctggacttagcatctcaagctgag
atgcaagagatgaccttacttagaaataaagtcacggatgtggagatcgctgaagtacta
tctcgtgctactggtattcctgtttctaagatgcttgaaggtgagcgagaaaagcttctg
catatggaggatgctctgcatacccaagtgataggccagaatgaagctgtggatgcggtt
tcgaatgcgattagacgtagtcgagctggtctatcagatcccgatcgtccaattggttcg
tttctgtttttaggtccaacaggggtggggaaaactgagctatgtaagtcactggctaag
tttctcttcgatactgagtcagcattagtgcgtatcgacatgtcagagtttatggaaaaa
cactctgttgcgcgtctgcttggggcgcctccaggatatgtgggctatgaagaggggggc
tacctaaccgaggctgtaagacgcaaaccttactcagtgatcttacttgatgaagttgag
aaggcgcacccagatgtatttaatatcttgttgcaggtacttgatgatggtcgcttaacc
gatggtcaaggaagaaccgtagattttagaaatactgttgtgatcatgacctcgaatcta
ggttcagatatcattcaggagcgcttttcgaccctatcttatgatgagatgaagtcagag
gtgatgaatgttgttgttcatagtttcagacctgagtttctgaaccgagttgatgagact
gtagtgttccatcctttgggcgaaaagcatattgaacatattgcttcaatccaaattgaa
tctttgatgcgacgtctagcggaaaaagattacgagctagatatcagtgatgacgcgctt
tcctttattgctagagctgggtttgaccccgtctatggtgcgcggccgttaaagcgtgct
ttacagcaagaggtggagaacccgttagctcagaagatactaagcggtagtttagtgccg
ggtaaaccgattatcgttgagaatgaagagggtgaactctcctttaagcagtaa
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integrated database retrieval system
