Shewanella woodyi: Swoo_3730
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Entry
Swoo_3730 CDS
T00676
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_3730
Enzymes [BR:
swd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Swoo_3730
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Swoo_3730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ACA87990
UniProt:
B1KDY8
LinkDB
All DBs
Position
complement(4544232..4544924)
Genome browser
AA seq
230 aa
AA seq
DB search
MRLDKYICESTSLTRSLAKKALHRGDVTCDGKVIKDSGFKVTDKQVICLEGEPLSVIGPR
FIMLNKPLDTICSTIDEEYPSVLGLLDVVKADELHIAGRLDVDTTGLVLITNDGQWSHKI
TSPKKECGKRYLLETAEPLKQEWVEEFAAGLQLNNEDGLTKPATLEILGSHQARLTITEG
KYHQVKRMLAAVGNCVTQLHRESVGEIELDESLASGEWRYLTEAEIKSVR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttagacaaatatatctgcgagtcgacttcacttacccgctctttagcgaagaaa
gcgctacatcgaggtgatgtgacctgtgatggtaaggtcattaaagattcggggtttaaa
gtaaccgataagcaggtgatctgtttagagggggagccgttaagtgtgataggtccacgc
tttattatgctaaataaaccccttgatacgatctgctcgaccatagatgaggagtatcct
tcggtcttaggtttactcgatgtggttaaagctgacgaactgcatatcgcaggtcgcttg
gatgtggacaccacagggcttgtattgatcaccaatgacggtcaatggtcccacaagata
acctctcctaagaaagagtgcggtaaacgctaccttttagaaacagctgaaccactaaaa
caggagtgggtggaggagtttgccgcaggtcttcaattgaataatgaagatggcttaact
aaacctgctactttggagattttaggttctcatcaagcacgcctaactatcactgaaggt
aagtaccaccaagttaagcgtatgctggcagctgtaggcaactgtgttactcaactgcat
cgtgaaagtgtaggggagatagagttggatgaatctcttgcttctggtgagtggcgctat
ttaacggaagctgagataaaatcggttcgttaa
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