Shewanella woodyi: Swoo_3792
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Entry
Swoo_3792 CDS
T00676
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
swd
Shewanella woodyi
Pathway
swd00550
Peptidoglycan biosynthesis
swd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Swoo_3792
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
swd01003
]
Swoo_3792
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Swoo_3792
Enzymes [BR:
swd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Swoo_3792
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Swoo_3792
Glycosyltransferases [BR:
swd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Swoo_3792
Peptidoglycan biosynthesis and degradation proteins [BR:
swd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Swoo_3792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ACA88051
UniProt:
B1KEN6
LinkDB
All DBs
Position
complement(4628139..4630511)
Genome browser
AA seq
790 aa
AA seq
DB search
MTDKETSKKPARKKAAPKSGAKKPAAKKRAAKAKSASKGSPSIGRRIWSISWKLGLILFV
GVLSYGIYLDQVIARKFEGQKWHLPAQVFSRSMALYPGAAVSHGQLIAELKLLGYRKVAN
PRQVGEFSASKTRVDLWRRPFLHPQGAQAEQRVMITFDQQGVSSVARNTDNRQLAVFHLE
PVLLDRIITGDGEDRLFVPTTKMPQSIIDSLILVEDRSFYEHHGVNPFAIIRAALVNISA
GRTVQGGSTLTQQLAKNFFLSSERSLVRKIREALMAIIIDFRYEKDEILEAYLNEVYMGQ
DKARGVHGMGLASQFYFGRPIAELTLPQQAFLVAVIKGPSYYNPWRYPERAASRRDLVLR
LLMEDGKLNVQQYTAAVESPLGLRSADKPVHQKLPAFFAVVQHELNRRFGDSLLKQSGIK
VYTTLDPMAQEAAEKAVKKTMARLGKNDKILQVGMVVTDKYSAGIAAMVGDKVPSYKGYN
RAVEIRRPIGSLVKPFVYATALNQPAKYTLATPLKDQPITLNNGHGKTWSPKNVDKKFRG
EVPLLTAFKRSINVPTVNLGMEMGVSSVATTLDKSGWRDKISEYPSMLLGAVNGSPLMVA
QVYQTIADNGRYRRLSSVTAVLDMENNPLPVARVEQDQALNPSSTYLVQYAMTQVVKSGT
ASRLGKAFPYVTLAGKTGTSNDSRDSWFAGFDERNVAAIWVGRDDNGKTGLYGSSGAMAV
YQDFLGTRPPISLRRPLISGVVNGHFDKTTGVAKEAGCENSIALPALEASYHPARNCGEP
LSWWQKLTGG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaagagacttcaaagaaacctgcgcgtaaaaaagcggctcctaaatctgga
gcgaaaaagccagcagccaaaaagcgtgcagccaaagcaaagagtgccagtaaaggctca
ccaagtataggcagacggatctggtctatcagctggaagctaggcctgatcttatttgta
ggcgtgttgagctacggcatctacctagatcaagtaatagctcgaaaatttgaggggcag
aaatggcacctacctgctcaagtgtttagccgctcaatggccctttatcctggcgcagct
gtgagtcacggtcagttaattgctgaattaaaattgctgggttatcgcaaagtggctaac
ccaaggcaagtgggtgagttctctgcatctaaaactcgggtagatttgtggcgtcgtccc
ttcctgcatcctcaaggagcccaagctgagcagagggttatgatcacttttgatcaacaa
ggggtaagttcggtagcaaggaacacagataatcgtcagttagcggtttttcatctcgaa
cctgtgctgcttgaccgtattattactggcgatggagaagatcgtctgtttgtcccgacc
actaagatgcctcagtctattatcgactcactgatcttggtggaagatcgcagcttctat
gaacatcatggcgtaaatccgtttgccattattcgtgccgcactggtgaatatcagtgcg
gggcgcacagtgcaggggggctcaacgttaacgcaacagctggcgaaaaacttcttcctc
tccagtgagcgctcgttagtgcggaaaattcgggaagccttgatggcgataatcatcgat
tttcgctatgaaaaggacgaaatattagaggcttatcttaatgaagtgtacatgggacaa
gataaagcccgtggagtacatggtatgggactggcctctcagttctatttcggtcgtccc
attgctgagttaactttgccgcagcaagcattcttggtcgctgtgataaagggcccctct
tactacaacccttggcgctatcctgagcgggctgcaagccgccgcgatctagtgctacgc
ctcttgatggaggacggtaagcttaatgtgcagcagtatactgctgccgttgagtcgcct
ttaggtcttcgaagtgccgacaaacctgtccatcaaaagctgcctgcatttttcgccgtg
gttcagcatgagcttaacagacgctttggcgactctttgttaaaacagtcgggtattaag
gtctatacaacgctggatcctatggcgcaggaagcggctgaaaaagcggtgaaaaagacc
atggcccgtctaggaaaaaatgacaagatattgcaagtgggtatggtggttaccgataaa
tattcggcaggtatagcagccatggtgggggataaagtgccgagttataaaggctataac
cgcgctgtagagatcaggcgtccaatcggctcactagtcaaaccttttgtctatgcgacc
gcgttgaatcaacctgctaaatatactttagcgacgccacttaaggatcaacctattacc
ctgaacaacggccatggtaagacctggtcacctaagaatgtggataagaagtttagaggt
gaagtaccactattgaccgcctttaagaggtcaattaacgtacctacggtcaatttaggt
atggagatgggggtcagcagtgtggcgaccacgctcgataaatctggctggagagataaa
ataagtgaatatccctctatgctgttaggtgctgttaatggctcaccgctgatggtcgct
caggtctatcaaaccatagcggacaacgggcgttatcgccgtttatcatcggtgacggct
gtgctggatatggagaataaccctctgcctgtggcgcgtgttgagcaggatcaagcattg
aatccaagctccacctatctggtgcaatatgccatgacccaagtggttaaatccggtacg
gcaagcaggcttggaaaggccttcccctatgtgaccttggcaggtaaaactgggaccagt
aatgactcccgcgactcctggtttgctggatttgatgagcgtaatgtcgctgccatctgg
gttggacgtgatgacaacggtaaaacaggtctttatggcagtagtggcgccatggctgtc
tatcaagactttctcggtactcgaccaccaatcagtctaagacgccctttaatcagtggg
gtggtcaatggccactttgacaaaacaaccggtgttgctaaagaggcgggctgtgaaaac
tctatcgcactgcctgcattggaagccagttatcatcccgctagaaactgcggtgaacct
ttgtcttggtggcagaagttgactggaggttaa
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